Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0321 ATGGGTTCGAATCTGGAACCAGTGCCAATTACATCCCAGAAACATGACCCGGCATGGAAGCATGTTCAGATGTTTAAGAATGGGGACAAGGTCCAGCTGAAGTGCATATATTGTCTGAAGATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACACCTTGCTTGTCAGAAAGGGAATGCTTCCACTTGCAGCCGTGTCCCCCATGATGTCAGGCTTCACATGCAGCAGAGTTTGGATGGGGTTGTGGTGAAGAAGAGGAGGAAGCAGAGGATCGAGGAGGAGATTATGAGTGTTAATCCTTTGACCACTGTTGTGAACTCACTTCCCAATAATAATCAGGTGGTGGATGTGAATCAGGGGCTGCAGGCCATTGGCGTGGAGCACAATTCAACTCTGGTAGTGAATCCTGGTGAAGGAATGAGTAGGAATATGGAAAGGAGGAAGAAAATGAGAGCTGCCAAGAATCCTGCAGCAGTTTATGCAAACTCTGAGGATGTTGTTGCTGTGGAGAAGAATGGATTGTTCCCCAAAAAGATGGACAACCACATTTATATGGCCATTGGTCGGTTTTTGTATGATATTGGCGCACCTTTTGATGCTGTGAACTTGGTCTTTTTTCAAGAAATGGTTGACGCAATTGCTTCAAAGGGGACGGGTTTTGAACGGCCCTCACATCATGAACTTCGGGGTTGGATCCTGAAGAATTCTGTGGAGGAAGTGAAGAATGATATAGATAGATGCAAGATGACTTGGGGGAGGACTGGCTGTTCCATTTTGGTTGACCAATGGACAACAGAAACTAGTAGAATACTGATAAGTTTTTTGGCATATTGTCCGGAAGGCCTAGTGTTTTTGAAATCCTTGGATGCTACTGAGATTTTAACTTCTCCTGATTTTCTGTATGACTTGATAAAACAAGTAGTAGAAGAAATTGGAGTTGGGAAAGTGGTGCAAGTGATTACATCAGGTGAAGAACAATATGGTATTGCTGGTAGACGGTTGATGGATACTTTTCCTACCCTTTATTGGAGCCCTTCTGCTGCTCATTGCATTGATTTGATACTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTGATTGAACAAGCTAAATCTGTAACAAGATTTGTGTACAATTACAGTGCAATTTTGAATATGGTTAAAAGGTATACCTTAGGGAATGATATTGTGGATCCCTCTTTCTCACGCTTTGCGACAAACTTTACCACATTGAAACGGATGGTTGATCTTAAACACAATTTACAGGCCTTGGTCACTTCTCAGGAGTGGGCGGATTGCCCATATTCAAAGCAAACCGCTGGTCTTGAAATGTTAGATTGCTTAAGCAATCAAACATTTTGGTCTTCATGCGACATGATTGTTTGTCTAACAGCTCCTCTCTTAAAAGTTCTGAGAATAGCTGGTAGTGAGATGAGACCTGGAATGGGATACGTTTATGCTGGAATGTACCGGGTAAAAGAAGCAATTAAAAAAGCACTTGGTAAGAGGGAGGAATATATGGTGTACTGGAATATTATACATCATAGATGGGAAAGGCTGTGGAATCATCCTCTTCATGCTGCTGGATTCTACCTTAATCCAAAGTTCTTCTATAGTATTCAAGGAGATATACTCGGTCAGATTGTCTCTGGAATGTTTGACTGCATAGAGAGATTGGTACCTGATACAAGAATCCAAGATAAAATTATCAAAGAGATAAACTTATACAAGTCTGCTGCAGGAGACTTTGGGAGAAAGATGGCAGTCAGAGCTAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGGGGATGCCCTAACTTGTCCCGGTTAGCAATTCGAATTCTCAGCCAAACATCTAGTGTCATGTCCTGCAAGAGAAACCAGGTTCCTTTTGAACAGATAATCAACACAAGGAATTACATAGAGCGCCAACATCTTACCGATCTTGTCTTCGTTCACTGCAATTTACGATTAAGACAAATGTTTATGAGTAAAGAGCAAAATTTTAGTGATCCCCTATCATTTGACAACGTTAGTAATGTTGAAGAATGGATTAGGCCGAGGGACTTATACGTAGACGATGAGTGTGGGAACTCAGATTGGATGGCACTGGATCCATCTTCAGTTAACACAATGCTTTTAAGGCCTTTAAATGATGAAACTGAAGATTTGGGTGAAGGTTATGATGATTATGAGATTTTCAGTTTTGGGAAAGACAGTGAGGATGAAAACACTGGAGACAAGTTGTTAGACCAATAG 2277 0.415 MGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRRKQRIEEEIMSVNPLTTVVNSLPNNNQVVDVNQGLQAIGVEHNSTLVVNPGEGMSRNMERRKKMRAAKNPAAVYANSEDVVAVEKNGLFPKKMDNHIYMAIGRFLYDIGAPFDAVNLVFFQEMVDAIASKGTGFERPSHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWTTETSRILISFLAYCPEGLVFLKSLDATEILTSPDFLYDLIKQVVEEIGVGKVVQVITSGEEQYGIAGRRLMDTFPTLYWSPSAAHCIDLILEDFGNLEWISAVIEQAKSVTRFVYNYSAILNMVKRYTLGNDIVDPSFSRFATNFTTLKRMVDLKHNLQALVTSQEWADCPYSKQTAGLEMLDCLSNQTFWSSCDMIVCLTAPLLKVLRIAGSEMRPGMGYVYAGMYRVKEAIKKALGKREEYMVYWNIIHHRWERLWNHPLHAAGFYLNPKFFYSIQGDILGQIVSGMFDCIERLVPDTRIQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQVPFEQIINTRNYIERQHLTDLVFVHCNLRLRQMFMSKEQNFSDPLSFDNVSNVEEWIRPRDLYVDDECGNSDWMALDPSSVNTMLLRPLNDETEDLGEGYDDYEIFSFGKDSEDENTGDKLLDQ* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0321 758 Pfam Protein of unknown function (DUF 659) 224 375 IPR007021 -
Gso18g0321 758 PANTHER OSJNBA0013A04.12 PROTEIN 7 732 - -
Gso18g0321 758 Pfam hAT family C-terminal dimerisation region 583 661 IPR008906 GO:0046983
Gso18g0321 758 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Gso18g0321 758 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 732 - -
Gso18g0321 758 SUPERFAMILY Ribonuclease H-like 257 664 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0321 Gso-Chr18 2947893 2951773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0321 - - gmx:100817502 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0321 18 2947893 2951773 Gso18g0321 18 2947893 2951773 ECH
Gso18g0321 18 2947893 2951773 Gso13g1297 13 28380954 28384793 GST