Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1297 ATGGGTTCGAATCTGGAACCAGTGCCAATTACATCCCAGAAACATGACCCGGCATGGAAACATGTTCAGATGTTTAAGAATGGGGACAAGGTGCAGCTGAAGTGCATATATTGTCTGAAGATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACACCTCGCTTGTCAGAAAGGGAATGCTTCAACTTGCAGCCGTGTCCCCCATGATGTCAGGCTTCACATGCAGCAGAGTTTGGATGGGGTTGTGGTGAAGAAGAGGAGGAAGCAGAGAATTGAAGAAGAGATTATGAGTGTTAATCCTTTGACCACTGTTGTGAACTCACTTCCCAATAATAATAATCGGGTGGTGGATGTGAATCAGGGGCTGCAGGCCATTGGAGTGGAACACAATTCTTCTCTGGTAGTGAATCCTGGTGAAGGAATGAGTAGGAATATGGAAAGGAGGAAGAAAATGAGAGCTACCAAGAATCCTGCAGCAGTTTATGCAAACTCTGAGGGTGTTATTGCTGTGGAGAAGAATGGATTGTTTCCCAAAAAGATGGACAACCACATTTATATGGCGATTGGTCGGTTTTTGTATGACATTGGTGCGCCTTTTGATGCTGTGAACTCGGTCTATTTTCAAGAAATGGTTGACGCAATTGCTTCAAGGGGGGTGGGTTTTGAACGGCCCTGGCATCATGAACTTCGGGGTTGGATCCTGAAGAATTCCGTGGAGGAAGTGAAAAATGATATAGATAGATGCAAGATGACTTGGGGGAGGACTGGCTGTTCCATTTTGGTTGACCAATGGACCACAGAAACGGGTAAAATACTGATAAGTTTTTTAGCGTATTGTCCTGAAGGCCTAGTCTTTTTGAGATCCTTGGATGCTACTGAGATTTCAACTTCTGCAGATTTTCTGTATGACTTGATAAAACAAGTAGTAGAAGAAGTTGGAGCTGGGCAAGTGGTGCAAGTGATTACGTCGGGTGAAGAACAGTATGGTATTGCTGGTAGACGGCTGACGGATACTTTTCCTACCCTTTATTTGAGCCCTTCTGCTGCTCATTGCATTGATTTGATTCTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTAATTGAACAAGCTAGATCCGTAACAAGATTTGTGTACAATTACAGTGCAATTTTGAATATGGTTAAAAGGTATACCTTAGGGAATGATATTGTGGATCCCTCTTTCTCACACTTTGCGACTAACTTTACCACATTGAAACGGATGGTTGATCTTAAACACAATTTGCAGGCCTTGGTCACTTCTCAGGAGTGGGCGGATAGCCCATATTCAAAGCAAACAGCTGGTCTTGAAATGTTAGATTGCCTAAGCAATCAAACATTTTGGTCCTCATGTGACATGATTGTTTGTCTAACAGCTCCTCTCTTAAAAGTTATGAGAATAGCTAGTAGTGAGATGAGACCTGCAATGGGATACGTTTATGCTGGAATGTACCGGGCAAAAGAAGCAATTAAAAAAGCACTTGGTAAGAGGGAGGAATATATGGTGTACTGGAATATTATACATCATAGATGGGAAAGGCTGTGGCATCATCCTCTTCATGCTGCTGGATTCTACCTTAATCCAAAGTTCTTCTATAGTATTCAAGGAGATATACATGGTCAGATTGTCTCTGGAATGTTTGACTGCATAGAGAGATTGGTACCTGATACAAGAATCCAAGATAAAATTATCAAAGAGATAAACTTATACAAGTCTGCTTCAGGAGACTTTGGGAGAAAGATGGCAGTCAGAGCTAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGGGGCTGCCCTAACTTGTCACGGTTAGCAATTCGTATTCTCAGCCAAACATCTAGTGTGATGTCTTGCAAGAGAAACCAGATTCCTTTTGAACAAATAATCAACACAAGGAATTATATAGAGCGCCAACATCTTACCGATCTTGTCTTTGTTCACTGCAATTTACGATTAAGACAAATGTTTATGAGTAAAGAGCAAGATTTTAGTGATCCCCTATCATTTGACAACATTAGTAATGTTGAAGAATGGATTAGGCCGAGGGATTTATACATAGATGATGAGTGTGGGAACTCAGATTGGATGGCTCTGGATCCATCTTCTGTTAACACAATGCTTTTGAGGCCTTTGAATGATGAAGCTGAAGATTTGGGTGAAGGTTATGATGATTATGAGATTTTCAGTTGTGGGAAAGATAGTGAGGATGAAAATACTGGAGACAAGTTGTTAGAGCAATAG 2280 0.414 MGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRRKQRIEEEIMSVNPLTTVVNSLPNNNNRVVDVNQGLQAIGVEHNSSLVVNPGEGMSRNMERRKKMRATKNPAAVYANSEGVIAVEKNGLFPKKMDNHIYMAIGRFLYDIGAPFDAVNSVYFQEMVDAIASRGVGFERPWHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWTTETGKILISFLAYCPEGLVFLRSLDATEISTSADFLYDLIKQVVEEVGAGQVVQVITSGEEQYGIAGRRLTDTFPTLYLSPSAAHCIDLILEDFGNLEWISAVIEQARSVTRFVYNYSAILNMVKRYTLGNDIVDPSFSHFATNFTTLKRMVDLKHNLQALVTSQEWADSPYSKQTAGLEMLDCLSNQTFWSSCDMIVCLTAPLLKVMRIASSEMRPAMGYVYAGMYRAKEAIKKALGKREEYMVYWNIIHHRWERLWHHPLHAAGFYLNPKFFYSIQGDIHGQIVSGMFDCIERLVPDTRIQDKIIKEINLYKSASGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQIINTRNYIERQHLTDLVFVHCNLRLRQMFMSKEQDFSDPLSFDNISNVEEWIRPRDLYIDDECGNSDWMALDPSSVNTMLLRPLNDEAEDLGEGYDDYEIFSCGKDSEDENTGDKLLEQ* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1297 759 SUPERFAMILY Ribonuclease H-like 258 665 IPR012337 -
Gso13g1297 759 Pfam Protein of unknown function (DUF 659) 225 376 IPR007021 -
Gso13g1297 759 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Gso13g1297 759 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 733 - -
Gso13g1297 759 Pfam hAT family C-terminal dimerisation region 591 662 IPR008906 GO:0046983
Gso13g1297 759 PANTHER OSJNBA0013A04.12 PROTEIN 7 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1297 Gso-Chr13 28380954 28384793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1297 - - gmx:100817502 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0321 18 2947893 2951773 Gso13g1297 13 28380954 28384793 GST