Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0315 ATGAATCACACTCGCTTGGAGTCTTGTCATGAATCTCCCCTTAAAGTATACAAATTCTGTTTTGTCCCAGAAAAACTTGGTGATATGGTTATACTCTTAATAAGGTTTGGCATTCTTGTGTGTCTTGTTGCATCCATATCACTTGCTCTCCACTCAGCATTCTCTAAACCAGACCGGTGGTTCCCGTTACCTGAGCATATTCGCGCCGTCCAGAATACTTCAGTCATTGACAACAGACCAACAAACATCTCACATCTTCAATTTGGCATTGCTGGATCAGCAAACACGTGGCATGGCCGTAGCAACTACACTAAACTATGGTGGGATCCTAACACCACTAGAGGTTATGTTTGGCTTGACAAGAAGCCTAAGATTTTGCACAGTGACATATTAGTACCACCTTATCAAATCTCACGGGGCTGGACTCGGTTCAAGCACGTGCACTCAGCATCTGCTGTTCGGATAGCTCGGATAGTTTATGAGAGCTTTAAACTTGGTTTGCCAAATGTCAGGTGGTTTGTGATGGGAGATGATGATACCGTGTTCTTTACTGAGAACTTGGTTACTGTGTTAGGAAAATATGATCACAATGAAATGTATTATATTGGTGGGAATTCTGAGAGTGTGGAACAAGATGTGATGCATTCTTATAACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGTAGATACTTCTATTTTTATGGTTCTGATCAAAGAGTCTGGGCCTGTATTCATGAAATTGGGGTGCCCCTTACCAGAGAAAATGGATTCCACCAGTTTGACATAAGAGGAAATCCATATGGTTTTCTAGCAGCTCACCCCTTGGTACCACTTGTATCACTCCATCACCTTGACCAATTGAGCCCCTTCTTTCCCAACCAGACTCAATTACACTCAATGAAAAAGCTCATCAGTGCATACCACATTGACCCTGCCCGGATAGTGCAGCAAAGTATATGCTATGATCATAAGCGTAGATGGTCAATATCTATTTCATGGGGTTACACTATACAAATCTATACAAAATTGTTGATAGCAGCAGACTTGCAGATGCCATTGCAGACATTTCAGACTTGGCGAAGTTGGAAGGATGGTCCCTTCATATTCAATACTCGACCTATGAGCTCTGACCCGTGCCAGCAGCCAGCTAGGTTTTTCCTGGATCAGGCTACAAAGGTGGGAAAAAGTGGAAGTATCACTATCTACAAGAGACATGAAGGCAAGGAAGCAAAGTGCAACAGAGAAGGCACTAATAATGAGGAAGTGCAAAGAATTAGAGTTTCTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCCCGTAGGCATTGCTGTCAACTTTTGGGTGGTGGAAGCATAAAGAATGGCAGTATGAATATCAGGATTAAGAAGTGCAGACCTCATGAAACAATTACTATTTAG 1476 0.4228 MNHTRLESCHESPLKVYKFCFVPEKLGDMVILLIRFGILVCLVASISLALHSAFSKPDRWFPLPEHIRAVQNTSVIDNRPTNISHLQFGIAGSANTWHGRSNYTKLWWDPNTTRGYVWLDKKPKILHSDILVPPYQISRGWTRFKHVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNEMYYIGGNSESVEQDVMHSYNMAFGGGGFAISYALAAQLAKIMDGCLSRYFYFYGSDQRVWACIHEIGVPLTRENGFHQFDIRGNPYGFLAAHPLVPLVSLHHLDQLSPFFPNQTQLHSMKKLISAYHIDPARIVQQSICYDHKRRWSISISWGYTIQIYTKLLIAADLQMPLQTFQTWRSWKDGPFIFNTRPMSSDPCQQPARFFLDQATKVGKSGSITIYKRHEGKEAKCNREGTNNEEVQRIRVSALKLDPEYWKNVPRRHCCQLLGGGSIKNGSMNIRIKKCRPHETITI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0315 491 Pfam Protein of unknown function, DUF604 211 463 IPR006740 -
Gso18g0315 491 PANTHER BNAA05G27650D PROTEIN 10 489 - -
Gso18g0315 491 Gene3D - 75 341 - -
Gso18g0315 491 PANTHER FRINGE-RELATED 10 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0315 Gso-Chr18 2871058 2876168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0315 10 489 Glycosyltransferase AT3G11420 55.936 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0315 - - gmx:100802549 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0315 18 2871058 2876168 Gso18g0315 18 2871058 2876168 ECH
Gso18g0315 18 2871058 2876168 Gso13g1304 13 28452925 28458093 GST