Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1304 ATGAGTCACACTCGCTTGGAGCATTGTCATGAATGTCCTCTTAAAGTATCCAAATTCTGTTTTGTCCCAGAAAAACTTGGTGGCATGGTTATACTCTTAATAATGTTTGGCATACTTGTGTGCCTTGTTGCATCCATATCACTTGCTCCCCACTCAGCATTCTCTAAACCGGACCGGTGGTTTCCGTTACCGGAGCATATTCTCGCCGTCCAGAAGAATACTTCAGTCATTCACAGTGGACCAACAAACATCTCACATCTTCAATTTGGCATTGCTGGATCAGCAAACACATGGCATGACCGTAGCAACTACACTAAACTATGGTGGAATCCTAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTTTGCACAGTGACATGTTAGTACCACCATATCAAATCTCAAGGGGATGGACTCGGTTCAAGTATTTGCACTCAGCATCTGCAGTTCGGATAGCTCGGATAGTTTACGAGAGCTTTAAGCTTGGTTTGCCAAATGTTAGGTGGTTTGTGATGGGGGATGATGATACCCTGTTCTTTACTGAGAACTTGGTCACTGTGTTGGGAAAATATGATCCCAATGAAATGTATTATATTGGTGGGAATTCTGAGAGTGTGGAGCAAGATGTGATGCACGCTTACAACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAACTCAACTAGCAAAAATAATGGATGGTTGTCTAAGTAGATATTTCTTTTTTTATGGTTCTGATCAAAGAGTCTGGGCATGTATTCATGAAATTGGGGTGCCCCTTACCAGAGAAAATGGATTCCACCAGTTTGACATAAGAGGGAATCCATATGGTTTTCTAGCAGCACACCCCTTGGTACCACTTGTATCACTCCATCACCTTGACCAATTGAGCTCCTTGTTTCCCAACCAGACTCAAATAAACTCAATGAAAAAGCTCATCAGTGCATACCATATTGACCCTGCGCGGATAGTGCAGCAAATCATATGCTATGATCATAAGCGCGGATGGTCGATATCTATTTCATGGGGTTACACTATACAAATCTATACAGCGTTGTTGATAGCAGCAGACTTGCAGATGCCATTGCAGACATTTCAGACTTGGCGAAGTTCGATGAATGGTCCCTTCATATTCAATACTCGACCTATGAGCTCTGATCCGTGCCAGCAGCCAACTATGTTTTTCCTGGACCAGGCTACAAAGGTGGGAAAAAGTGGAAGTATCACTATCTACAAGAGACATGAAGGCAATGAATCAAAGTGCTTGAGATCAGGCACCAATAATTTGGAATTGCAAAGAATTAGAGTTACTGCCTTGAAGCTGGATCCAGAATATTGGAAGAATGTACCGCGCAGGCATTGCTGCCAATTATTGGGTGGTGGAAGCATAAAGAATGGCAGTATGGATATCAGGATTAAGAAGTGCAGATCTCACGAAACAATTACTATTTAA 1479 0.4239 MSHTRLEHCHECPLKVSKFCFVPEKLGGMVILLIMFGILVCLVASISLAPHSAFSKPDRWFPLPEHILAVQKNTSVIHSGPTNISHLQFGIAGSANTWHDRSNYTKLWWNPNTTRGFVWLDKKPKILHSDMLVPPYQISRGWTRFKYLHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTLFFTENLVTVLGKYDPNEMYYIGGNSESVEQDVMHAYNMAFGGGGFAISYALATQLAKIMDGCLSRYFFFYGSDQRVWACIHEIGVPLTRENGFHQFDIRGNPYGFLAAHPLVPLVSLHHLDQLSSLFPNQTQINSMKKLISAYHIDPARIVQQIICYDHKRGWSISISWGYTIQIYTALLIAADLQMPLQTFQTWRSSMNGPFIFNTRPMSSDPCQQPTMFFLDQATKVGKSGSITIYKRHEGNESKCLRSGTNNLELQRIRVTALKLDPEYWKNVPRRHCCQLLGGGSIKNGSMDIRIKKCRSHETITI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1304 492 Gene3D - 77 342 - -
Gso13g1304 492 PANTHER BNAA05G27650D PROTEIN 10 490 - -
Gso13g1304 492 Pfam Protein of unknown function, DUF604 212 464 IPR006740 -
Gso13g1304 492 PANTHER FRINGE-RELATED 10 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1304 Gso-Chr13 28452925 28458093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1304 7 490 Glycosyltransferase AT3G11420 55.888 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1304 - - gmx:100802549 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0315 18 2871058 2876168 Gso13g1304 13 28452925 28458093 GST