Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0313 ATGAAGCATTCAACTTTGAGTGAGAGGAGCCAAAATCTACATTCATTAACCTCTAATCTACATGATTCAATGAAGGACGAATATGTACAATGTGATGCTGGATATCCAAACAAGACTACCATAGCATGTATGATCAATGCAGAAATTAGTGCTGTTTTGGCTGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTACATGTCAGATGATGACCAATCAGAGCACTTTCTTGTTCAGTCTTTAAAGACATTAAGGAGGCATGTTTTCTCATGGCATAACCAATGGCATGCCATCAACCCTGCCTTGTATCTCCAGCCCTTTTTGGATGTGATACGATCAGATGAAACTGGTGCACCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAAATCTTAACTCTAGATGTGATTGATCAACACACTGTCAATGTTGGGGATACCATGCACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAAGTTACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTAGCATGTGTGAAAGGTAAAGCATCTGTAATGCTGAGTAACCAACACATTTGCACCATAGTGAATACTAGTTTCCGTATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAACGAATAGCACGGTATACAATGCATGAACTGGTTAGGTCTATATTTTCTCACCTTCAGAATATTGACAACACAGAGTCTGCATTCATAAAAGGGACAGCTACCTTAAAACAAGAGACCAATGGACTAAATAATGACCATGCTTTGGCCAGCAGACAATTGGAAAATGGGAGGCTGAATTCTGCACAGGATGCTCAACCATTATCTACAGGCATTGCTTCCAGTACTGCAACAGACTTGACAGCAGCTGTAATTGATGAAAACAAAGCTATTGCTTGCAATGGCAATGAGATTGATCCACATGAATTACAGCTCATGACTGAACCATATGGGGTTCCATGTATGGTGGAAATATTTCACTTCTTGTGTTCTTTGCTGAATGTTGCTGAGCATATGGGAGTGAATCCTAGATCAAACACAATAACATTTGATGAAGATGTTCCTCTTTTTGCATTAAATTTGATTAATGCAGCCATAGAGTTGGGAGGGCCATCCTTTCGCTGTCACCCAAGATTACTGAGTTTAATTCAGGAAGAATTATTCCGCAATCTTATGCAATTTGGTTTATCAATGAGCCCTCTTGTACTTTCAATGATGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTTATTTTGAGGCTTGCTCAAAGCAAATATGGGGCTTCATATCAGCAACAGGAGGTTGTGATGGAAGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATGCTAACTTTGACTGTGACATAAGTTGCAGTAATGTCTTTGAAGATCTTGCTAATTTGTTGTCCAAAAGCGCATTTCCTGTGAACAATCCATTATCTTCCATACATGTTCTTGCGTTGGATGGTCTTATTGCTGTAGTGCAGGGAATGGCCGAAAGGATAGGTAGTAGATCTTTAAGTTCAGAACAATCTCCTGTGAATTTTGAGGAGTATACTCCATTCTGGATGGAAAAGTGTGACAGTTTTGGTGACCCAAATGATTGGGTTCCTTTTGTCCGCCAAAGAAAGTACATAAAGAGAAGATTAATGATTGGAGCTGATCACTTCAATCGGGATGTTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTGAGATACACTGCTGGGTTGGATAAGAATCTCATTGGTGATTACCTTGGAAATCATGATGAACTCTGTGTTCAGGTTCTTCATGAATTTGCTAGGACATTTGATTTCCAAGATATGACCTTAGACACAGCCCTGCGTGTATTTTTGGAGACTTTTAGGCTGCCTGGAGAATCTCAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCACACATCCTTGCTAACAAGGATGCTGCTCTTGTGTTGTCATACTCAATTATATTGCTTAATACAGATCATCATAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCAGGAATAATAGGCGTATAAATGATGGCAACGATCTTCCTCGAGAATTCCTGTCAGAGATTTACCATTCAATTTGTAAAAATGAAATCCGTACCACTCCTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGATGGATTTCTCTGATGCACAAGTCAAAGAAAACTGCTCCATTCATCGTATCTGATTCTAGAGCATACTTGGATTATGATATGTTTGTGTTATTGTCAGGCCCAACAATTGCTGCCATTTCTGTGGTTTTTTATGATGCTGAAAATGAAGAGGTATACCAAACATGTATGGATGGATCCTTAGCTGTTGCAAAGATATCAGCCTACTATCATCTTGAAAATGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCATTACCATTTGGGATCCACTATCAGTTGAGGAATCTGTCCTGGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGCGATTACATCCGCGCAGGGTGGAGGAATATTCTTGAATGCATTTTAATATTTCACAAGTTAGGCCTCCTTCCTACTCGGTTGGCCAGTGATGCAGCTGACGAGTCAAAGGTAACTATAGAAAATGGACATGGGAGGTCTAATTCAATTTCTTTATCATCAACTCATCTTCAATATATTACTCCAAAGAGATCCTCGGGATTAATTAGCAGGTTTAGTCAACTCTTGTCTCTTGGTGCTGAAGAGGCACAATCAATACCAACTGAAGAACAACTGGTCGCTCATCAGCAAGCTACACAAGCAATTCATAAGTGTCACGTTGACAGCATATTCACTGAGAGCAAATTTCTGCAAGCTGAATCTCTATTGCATCTTGCGAAAGCGCTCATTAATGCTGGAGCTCAACATCTGAAAGGGAGCAGAATATCTGAGGATGAAGACACTTCAGTTTTCTGTCTGGAGTTACTGGTGGCAATCACTCTCAATAACAGGGATAGAGTTGGACATCTCTGGAGGGATGTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATGCCTTGTGCACTGGTAGAAAGGGCTATTTTTGGACTTCTTAGAATTTGCCATCGCTTACTTCCCTACAAAGAGAACATTACTGATGAACTTTTGAGGTCCCTGCAACTTGTCTTGAAGCTTGATGCTCGGGTTGCAGATGCATACTATGAGCAGATTACACGGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCACATATTAGATCTCAGTCTGGATGGCGGACAATTTCATCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCTGGATTTGATGCGCTGATATTCATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTATGTTCTATGTGTAGATGTTGCGAGACATTTTGCTGAGTCTCGTGTAGGACTGGTAGATCGGTCTATAGTTGCACTAGATCTAATGGCAGGTTCTATTAATTGTTTAGAAAAGTGGTCTAATAATGCTAAGAAAGCAGTCAAAGAAGATGAAGTGGAAAAGATGTTGCAAGATATTGGGGAAATGTGGTTTAGGCTAGTTCAGGGACTGAGGAAAGTATGTCTGGACCAGAGAGAGGAGGTTAGAAATCATGCATTGTTATCTTTGCAACAGTGCTTGACAGGAGCTGTTGGAACTCACATCCCACGCGAGTTGTGGTTAACTTGTTTTGATCAAGTGATCTTCACTGTGCTGGATGACCTGCTTGAAATTGCACAGGCACACTCTCAGAAGGACTACAGGAACATAGAAGGAACACTTGTTATTGCCTTGACACTCTTGTCTAAGGTTTTCCTCCAGTTACTCCAAGAACTATCGCAATTTGAAACCTTCTGCAAACTATGGGAGGATATGCTAGGCTGTATGGAAAAATGTGTGAAGATGAAAATTCAGGGAAAGAGAAGTGAGAAGCTTCAGGAGCTTGTGCCTGAGCTTCTGAAGAACATTTTGCTTGTTATGAAAGCTGGGGGCATTCTAGTGCACAGCAGTGGCTCAGGAGATAATAGTTTGTTGGAACTGGCATGGCAACATATGAAGAATATTGCTCCGTCGTTGCAGTCTGAGGTGTTCCCTGAGCAAGATTCAGAACAGTTACAGATTCAGCACAAACAGATTGAACCAGTTGGAAGCTTGGGACCTGATGCAAACATTTCTGTTCCTTCAAATGAAAAAGTGGGCCAAGATGGTGCTGTGATCAGTTAA 4449 0.4075 MKHSTLSERSQNLHSLTSNLHDSMKDEYVQCDAGYPNKTTIACMINAEISAVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRHVFSWHNQWHAINPALYLQPFLDVIRSDETGAPITGVALSSVYKILTLDVIDQHTVNVGDTMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKGKASVMLSNQHICTIVNTSFRIVHQAGTKGELLQRIARYTMHELVRSIFSHLQNIDNTESAFIKGTATLKQETNGLNNDHALASRQLENGRLNSAQDAQPLSTGIASSTATDLTAAVIDENKAIACNGNEIDPHELQLMTEPYGVPCMVEIFHFLCSLLNVAEHMGVNPRSNTITFDEDVPLFALNLINAAIELGGPSFRCHPRLLSLIQEELFRNLMQFGLSMSPLVLSMMCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDISCSNVFEDLANLLSKSAFPVNNPLSSIHVLALDGLIAVVQGMAERIGSRSLSSEQSPVNFEEYTPFWMEKCDSFGDPNDWVPFVRQRKYIKRRLMIGADHFNRDVKKGLEFLQGTHLLPDKLDPQSVACFLRYTAGLDKNLIGDYLGNHDELCVQVLHEFARTFDFQDMTLDTALRVFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRRINDGNDLPREFLSEIYHSICKNEIRTTPEPGFGFPEMTPSRWISLMHKSKKTAPFIVSDSRAYLDYDMFVLLSGPTIAAISVVFYDAENEEVYQTCMDGSLAVAKISAYYHLENVLDDLVVCLCKFITIWDPLSVEESVLAFGDDTKARMATETVFTIANRYGDYIRAGWRNILECILIFHKLGLLPTRLASDAADESKVTIENGHGRSNSISLSSTHLQYITPKRSSGLISRFSQLLSLGAEEAQSIPTEEQLVAHQQATQAIHKCHVDSIFTESKFLQAESLLHLAKALINAGAQHLKGSRISEDEDTSVFCLELLVAITLNNRDRVGHLWRDVYEHISNIVQSTVMPCALVERAIFGLLRICHRLLPYKENITDELLRSLQLVLKLDARVADAYYEQITREVSRLVKANASHIRSQSGWRTISSLLSITARHLEASEAGFDALIFIMSDGAHLLPANYVLCVDVARHFAESRVGLVDRSIVALDLMAGSINCLEKWSNNAKKAVKEDEVEKMLQDIGEMWFRLVQGLRKVCLDQREEVRNHALLSLQQCLTGAVGTHIPRELWLTCFDQVIFTVLDDLLEIAQAHSQKDYRNIEGTLVIALTLLSKVFLQLLQELSQFETFCKLWEDMLGCMEKCVKMKIQGKRSEKLQELVPELLKNILLVMKAGGILVHSSGSGDNSLLELAWQHMKNIAPSLQSEVFPEQDSEQLQIQHKQIEPVGSLGPDANISVPSNEKVGQDGAVIS* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0313 1482 Pfam Sec7 domain 577 760 IPR000904 GO:0005085|GO:0032012
Gso18g0313 1482 CDD Sec7 577 760 IPR000904 GO:0005085|GO:0032012
Gso18g0313 1482 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 20 1473 - -
Gso18g0313 1482 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 20 1473 - -
Gso18g0313 1482 SUPERFAMILY Sec7 domain 573 762 IPR035999 GO:0005085|GO:0032012
Gso18g0313 1482 Gene3D - 570 652 - -
Gso18g0313 1482 SMART sec7_5 573 760 IPR000904 GO:0005085|GO:0032012
Gso18g0313 1482 SUPERFAMILY ARM repeat 361 1397 IPR016024 -
Gso18g0313 1482 MobiDBLite consensus disorder prediction 1460 1482 - -
Gso18g0313 1482 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 330 491 IPR032691 -
Gso18g0313 1482 Gene3D - 653 767 IPR023394 -
Gso18g0313 1482 ProSiteProfiles SEC7 domain profile. 569 758 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0313 Gso-Chr18 2853738 2860815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0313 K18443 - gmx:100802024 2856.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0313 18 2853738 2860815 Gso13g1305 13 28462578 28469275 GST