Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1305 ATGGGACGTCTGAAGCTGCAAGCTGGTATCAATGCAATAGAGGAAGAGGAACCTGAGGAATGTGATGCTGCCTATCCTAACAAAACTACTTTGGCATGCATGATCAATTCAGAGTTTGGTGCTGTTTTGGCGGTCATGAGAAGAAATGTAAGATGGGGAGGTCGTTATATGTCTGGCGATGATCAGCTGGAACACTCTCTTATTCAGTCTTTCAAGACAGTAAGGAGACAAATCTTTTTGTGGCACCACCATCAGTGGCAAGCTATCAACCCTTCTTTGTATCTACAGCCATTTTTAGATGTAATTAGGTCTGATGAAACTGGTGCCCCAATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATTTTGACTCTTGATGTGATCGATCATAATACTGTCAATGTTGAGGATGCCATGCACTTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATCCTTCTTCAGAAGAAGTTGTTTTAATGAAGATACTACAAGTTCTCCTAGCTTGTATGAAAAGTAAAGCATCTATAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGGATTGTTCACCAAGCAGGAAGTAAAGGTGAGTTGTTGCAGCAGATAGCACGGCACACAATGCATGAACTTGTAAAGTGTATTTTCTCTCACCTTCAAGAGGTTGGCAACACAGACCATGCATTGGTTAATGGGAGCACTAATTTGAAACAGGAGACCGGAGGCCTAGATAATGAGTATGCATTTGGAAGTAGACAATTGGAGAATGGCAGCATGACTTCTGAATATGATAATCAGTCATTATCCACAAACTCTGCTCCCAATGATGCAAGTGTTGTGAAAGCAACTGTGATGGACAAAAACACAGCGATAACTATTAGTGGCAAGGAGGGTGGACCATATGATATGCACCTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTGTCGAGCATACGGGAATGGGTCCTAGATCAAACACACTAGCATTTGATGAAGATGTGCCTCTCTTTGCCTTAAATTTAATTAATTCAGCTATAGAACTTGCAGGACCTTCTATTTGTCGTCACCCAAGGTTGCTGAACTTAATTCAGGATGAATTGTTTCATAATCTGATGCAGTTTGGTTTGTCAATGAGTCCCCTTATACTTTCGATGGTGTGTAGCATTGTTCTCAACCTGTATCGTCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTCATTTTGAGACTTGCACAAAGCAGATATGGGGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTTGACTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAATTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTATTGTCCAAAAGTGCATTTCCTGTGAACTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCAGTTAATCTTGAAGAGTATACTCCATTCTGGATGGTTAAATGTGAGAATTATAATGATCCAAATCATTGGGTTCCTTTTGTCCGCCGAAGAAAGTACATAAAGAGAAGACTGATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTCTAGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTCTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCCTTGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCTCTGCGTCTATTCTTAGAGACTTTCAGACTGCCTGGAGAATCACAAAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGATCAGCACAATGTGCAAGTTAAAAAGAAGATGACAGAAGAGGATTTTATCCGGAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAAATGCTGACAGAGATTTACCATTCAATTTGTAAGAATGAAATTCGCACAACCCCTGAACAAGGTGTTGGGTTTCCTGAAATGACACCAAGTCGGTGGATTGATCTAATGCATAAGTCCAAAAAAACTGCTCCATTTATTGTATCTGATTCTAAGGCTTACCTTGATCATGATATGTTTGCCATAATGTCAGGCCCAACGATTGCTGCCATCTCTGTTGTATTTGATCATGCTGAACAGGAAGAGGTATACCAAACATGTATGGATGGATTCTTAGCTATTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCTCTTTGCAAGTTCACTACACTTTTAAACCCATCATCAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGACTGGCAACTGTGACAGTGTTCACTATAGCAAACAGGTATGGGGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGACTGCACAAGCTTGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGACGAATCAGAACATTCTGCTGAAACTGTGCATGGAAAGCCTATTATGAATTCTTTATCCTCAGCTCATATGCAATCTATTGGCACCCCAAGGAGATCTTCAGGATTGATGGGTAGATTTAGTCAACTCTTATCTCTTGACACTGAGGAACCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTACAAACCATACAGAAGTGTCATATTGACAGCATATTCACAGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTAGCAAGAGCACTCATTTGGGCTGCAGGGAGACCACAAAAAGGAAACAGCACACCTGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTATGAACACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCCTGCGGATTTGCCAGCGGTTGCTTCCCTACAAGGAGAACATTGCTGATGAACTTCTGAGGTCTTTGCAACTGGTCTTGAAGCTTGATGCCCGGGTTGCAGATGCATACTGTGAGCAGATTACTCAGGAGGTCAGTCGCCTTGTGAAAGCAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGGACAATTACATCACTACTTTCCATCACAGCTAGACACATAGAAGCATCTGAGGCTGGGTTTGATGCACTATTGTTCATAATGTCTGACGGTACCCACTTGCTTCCAGCTAACTACGTTCTCTGTGTAGATACTGCCAGGCAGTTTGCTGAGTCTCGCGTTGGACAAGCAGAGCGATCTGTGCGGGCACTAGATCTCATGGCAGGGTCTGTCAATTGCTTGGCCCTGTGGACTAGTGAGGCTAAGGAAGCAATGGAGGAGGAACAAGTGTCTAAGTTATCTCAGGATATTGGAGAAATGTGGTTGAGACTAGTACAAGGTCTAAGGAAGGTATGTTTAGACCAGAGAGAGGAGGTTAGAAATCATGCTTTATTATCTCTGCAGAAGTGCTTGACAGGGGCCGACGGCATTTATCTACCATATAGCTTGTGGTTACAATGTTTTGATCTTGTGATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAGAAGGACTACCGCAACATGGAAGGCACACTTATCTTAGCAATGAAGCTCTTGTCCAAAATTTTTCTTCAATTACTCCCAGAGTTATCACAATTGACAACCTTCTGTAAGCTATGGTTAGGTGTACTGAGCAGAATGGAAAAATATATGAAGGTGAAGGTTAGGGGGAAAAGAAGCGAGAAGCTTCAAGAGACAGTGCCTGAGCTGCTTAAAAACTCCTTGCTTGTTATGAAGATGAGGGGTATACTGGCCCAGAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAACTTACATGGCTACACGTGAATAACATTTCACCATCATTGCAACTTGAGGTATTCCCTGAGCAGGATTCTGAGCATTTGCAGCACAAACAGGGTGAATCAATAAGTTTGCTGCCTGATGAAAAGGGTTTCGTGCCTTCAAGTGAAACAACAAGCTGTGAAGATGCTGGCATTGTTGGTTAA 4419 0.4207 MGRLKLQAGINAIEEEEPEECDAAYPNKTTLACMINSEFGAVLAVMRRNVRWGGRYMSGDDQLEHSLIQSFKTVRRQIFLWHHHQWQAINPSLYLQPFLDVIRSDETGAPITGVALSSVYKILTLDVIDHNTVNVEDAMHLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASIMLSNQHVCTIVNTCFRIVHQAGSKGELLQQIARHTMHELVKCIFSHLQEVGNTDHALVNGSTNLKQETGGLDNEYAFGSRQLENGSMTSEYDNQSLSTNSAPNDASVVKATVMDKNTAITISGKEGGPYDMHLMTEPYGVPCMVEIFHFLCSLLNVVEHTGMGPRSNTLAFDEDVPLFALNLINSAIELAGPSICRHPRLLNLIQDELFHNLMQFGLSMSPLILSMVCSIVLNLYRHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYNDPNHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREMLTEIYHSICKNEIRTTPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEQEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARLATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESEHSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDALLFIMSDGTHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMAGSVNCLALWTSEAKEAMEEEQVSKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCLTGADGIYLPYSLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKIFLQLLPELSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSEKLQETVPELLKNSLLVMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHLQHKQGESISLLPDEKGFVPSSETTSCEDAGIVG* 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1305 1472 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Gso13g1305 1472 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Gso13g1305 1472 Gene3D - 644 760 IPR023394 -
Gso13g1305 1472 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1441 - -
Gso13g1305 1472 Gene3D - 561 643 - -
Gso13g1305 1472 SUPERFAMILY Sec7 domain 565 752 IPR035999 GO:0005085|GO:0032012
Gso13g1305 1472 SUPERFAMILY ARM repeat 216 1346 IPR016024 -
Gso13g1305 1472 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Gso13g1305 1472 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1441 - -
Gso13g1305 1472 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Gso13g1305 1472 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1305 Gso-Chr13 28462578 28469275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1305 K18443 - gmx:100789153 2897.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0313 18 2853738 2860815 Gso13g1305 13 28462578 28469275 GST