Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0306 ATGGTTTCTCTTGATGGAGCAACTGTTGAGCCATTTGGATCATTTGTATCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAACAAACTTTCTTGGGGGATGTTTTAAAAGCTTTGAGAATGAAAGGTGGAGGGAGCAACTTGCAGTTCATCTCCAATGCACGAGTGCCCATTTTAAAATTTAAAAGCTACCGGCAGGGTGTATCTTGTGACATTTCAATTAATAACCTGCCTGGTCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGTTTTCATCATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCGAAAGCTGGAACTTTCAACTCCTATTCACTAAGTTTGCTTGTGATATTTTATTTTCAGACATGTATTCCTGCAATTTTTCCACCGCTTAAAGATATATACCCTGGCAACATGGTTGATGATCTTATAGGCGTTAGATCTGATGCAGAGAATCTTATTGCACAAACATGTGATGCTAACATAAACCGGTTCATATCAAACAGGGCAAGGTCAATTAACAGAAAATCTGTGGCTGAGCTTTTTGTTGAATTCATAGGAAAGTTTGCTAAGATGGATTCAATGGCCGTGAAGATGGGAATTTGCCCCTATTCTGGAAAATGGGAACAAATAGAGGACAATATGATTTGGTTACCCAAGACTTATGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCAAGATCCGTTAGCGCAGGACAACTGAAGAAGATAACTGAGGCATTTGCAAGGACGCATGACTTGCTTACCTCAACAAATCAGAATCAAATTTCACTTTTGTCCAACATGGCACCTGCGCATGTTATAAGATGTATCACAAGGCCTTATGGTGGAGGTTACTTTCACCCAACTCAGCCACAAGTGCAGAGGGCCATACGCCCACAACTGCAGTCGCAACGTCATTTTCAAAATGTCAGTCAAGGAACAAGCTCCAACAGTTCATCTTCAAAAGGACATACATTGGTGCATAGAGGCCAACAGATATGGAGGCCAAAGAGTTAA 1125 0.4009 MVSLDGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFHHMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISNRARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITEAFARTHDLLTSTNQNQISLLSNMAPAHVIRCITRPYGGGYFHPTQPQVQRAIRPQLQSQRHFQNVSQGTSSNSSSSKGHTLVHRGQQIWRPKS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0306 374 MobiDBLite consensus disorder prediction 341 374 - -
Gso18g0306 374 SUPERFAMILY Nucleotidyltransferase 6 106 IPR043519 -
Gso18g0306 374 MobiDBLite consensus disorder prediction 341 363 - -
Gso18g0306 374 CDD NT_PAP_TUTase 6 107 - -
Gso18g0306 374 Gene3D - 111 287 - -
Gso18g0306 374 PANTHER POLY A POLYMERASE CID PAP -RELATED 3 357 - -
Gso18g0306 374 Gene3D Beta Polymerase, domain 2 6 110 IPR043519 -
Gso18g0306 374 PANTHER PROTEIN HESO1 3 357 - -
Gso18g0306 374 SUPERFAMILY PAP/OAS1 substrate-binding domain 113 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0306 Gso-Chr18 2784835 2792860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0306 - - gmx:100800950 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0306 18 2784835 2792860 Gso18g0306 18 2784835 2792860 ECH
Gso18g0306 18 2784835 2792860 Gso13g1314 13 28556808 28563276 GST