Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1314 ATGAGTACACATAGTATGTTGGATATTGTTGTAAATGATATACTTCGAGTGGTCACACCATTACAAGAAGATTGGGAGATACGGTTTGCAATTATTAACGATTTTCGAAGCATTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAGCCATATGGATCATTTGTGTCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCAGGGAAAAAACAAAAACAGACTTTATTGGGGGAGGTTTTAAAAGCTTTGAGAATGAAAGGTGGAGGGAGTAACTTGCAGTTCATCTCCAATGCTAGAGTGCCCATTTTAAAATTTAAAAGCTACCGGCAGGGTGTATCTTGTGACATTTCAATTAATAACCTTCCAGGCCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGTTTTCGTCATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCAAAAGCTGGAACTTTCAACTCCTATTCGCTAAGTTTGCTTGTGATATTTTATTTTCAGACATGTATTCCTGCAATTTTCCCACCGCTTAAAGATATATACCCTGGCAACATGATTGATGATCTTATAGGTATTAGATCTGATGCAGAGAATCTTATTGCAGAAACTTGTGATGCTAACATAAACCGGTTCATATCAAACAGGGCAAGGTCAATTAACAGAAAATCTGTGGCGGAACTTTTTGTTGATTTCGTAGGGAAGTTTGCTAAGATGGATTCAATGGCCGTGGAGATGGGAATCTGCCCCTATACTGGAAAATGGGAACAGATAGAGGACAATATGATTTGGTTGCCCAAGACTTACGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAAAATACTGCAAGATCCGTCAGTGCAGGACAACTGAAGAAGATAACAGAGACATTTGCAAGGACGCACGACTTGCTTACCTCAACAAATCAGAATCAAATTTCACTTTTGTCCAACTTAGCACCAGCACATGTAATAAGATGTATCACAAGGCCTTACGGTGGAGGTTACATTCACCCAACTCAGCCACAAGTGCAGAGGGGTGTTGCTTACTTTCACCCAACTCAGCCGCAAGTGTTCCGCCCAACTCAGCCACAGGTGCAGAGGGCCATACGCCCGCTGCAACCGCAGTCGCAACATCATTTTCAAAATGCCAGTCAAGGAACAAGCTCCAACAGTTCATTTTCAACTGGACAAATACAAGCGCGTAAAGGAGTGAGCTCCAACAGTTCATCTTCAAAAGGACATACGCCGGTGCATAGAGGCCAACAGATGTGGAGGCCAAAGAGTTAA 1368 0.4159 MSTHSMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKFKSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISNRARSINRKSVAELFVDFVGKFAKMDSMAVEMGICPYTGKWEQIEDNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLKKITETFARTHDLLTSTNQNQISLLSNLAPAHVIRCITRPYGGGYIHPTQPQVQRGVAYFHPTQPQVFRPTQPQVQRAIRPLQPQSQHHFQNASQGTSSNSSFSTGQIQARKGVSSNSSSSKGHTPVHRGQQMWRPKS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1314 455 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Gso13g1314 455 Gene3D - 152 328 - -
Gso13g1314 455 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
Gso13g1314 455 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 434 - -
Gso13g1314 455 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Gso13g1314 455 CDD NT_PAP_TUTase 27 148 - -
Gso13g1314 455 MobiDBLite consensus disorder prediction 401 455 - -
Gso13g1314 455 MobiDBLite consensus disorder prediction 401 444 - -
Gso13g1314 455 PANTHER PROTEIN HESO1 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1314 Gso-Chr13 28556808 28563276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1314 - - gmx:100791794 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0306 18 2784835 2792860 Gso13g1314 13 28556808 28563276 GST