Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0302 ATGGCTCTTTCACCACTCAGCATGCTTGTGGTCATTGCCACCATCTTCCTCCCATCCGTTGCTGTGGCCAAGGAATTCGTAGTTGGTGATGGTCATGGATGGACAATAGGCTTTGATTATGCAGCTTGGGCTGCAGATAAGACCTTCCAAGTTGGGGATGTACTTGTATTCAATTATGCTGTTGGAGAACACAATGTGTTCAAAGTGAATGGAACTGCATTCCAGAGCTGCACGATTCCTCCAGCAAGTGAAGCATTGTCTACTGGAAATGACCGTATTGTATTGGCAATTCCTGGCAGAAAATGGTACATATGTGGTGTTGAAGATCACTGCAGTGCTGGCCAAAAGCTTGTTATCACAGTTCAACCCCAAACACTGCCTCCAACTCTACCACCATCACCTACTCCTGCACCTTCGCCTCGTCAACATCGTCCTCATTTTGGTCGATGGGTGCCTAATATTTTTCATTAA 471 0.4607 MALSPLSMLVVIATIFLPSVAVAKEFVVGDGHGWTIGFDYAAWAADKTFQVGDVLVFNYAVGEHNVFKVNGTAFQSCTIPPASEALSTGNDRIVLAIPGRKWYICGVEDHCSAGQKLVITVQPQTLPPTLPPSPTPAPSPRQHRPHFGRWVPNIFH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0302 156 CDD Phytocyanin 24 121 - -
Gso18g0302 156 Gene3D - 22 126 IPR008972 -
Gso18g0302 156 PANTHER BLUE COPPER PROTEIN 9 131 IPR039391 GO:0009055
Gso18g0302 156 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Gso18g0302 156 MobiDBLite consensus disorder prediction 125 147 - -
Gso18g0302 156 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Gso18g0302 156 PANTHER BLUE COPPER PROTEIN-LIKE 9 131 - -
Gso18g0302 156 MobiDBLite consensus disorder prediction 125 141 - -
Gso18g0302 156 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0302 Gso-Chr18 2741994 2743004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0302 8 145 Miscellaneous Gene Families AT2G32300 38.621 6.04e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0302 - - gmx:102660119 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0302 18 2741994 2743004 Gso13g1320 13 28622307 28623586 GST