Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1320 ATGGCTCTTTCACCACTCGGCATGCTTCTGGTCATTGCCACCATCTTACTCCCATTCAATATTGTTGTGGCCAAGGAATTTGTTGTTGGCGATGATCATGGATGGACAATAGGCTTTGATTACGCAGCTTGGGCTGCAGATAAGACCTTCCAGGTTGGGGACCTACTTGTGTTCAAGTATGCTGTTGGAAAACACAACGTGTTCAAAGTGAATGGAACAGCATTTCAGAGCTGCACGATTCCTCCAGCAAGTGAGGCATTGACCACTGGAAGTGATCGTATTGTGTTGGCAATTCCTGGCAGAAAATGGTACATATGTGGTGTTGTTGGTCACTGCAATGCTGGCCAAAAGCTTGTTATCACAGTTCAACCCCAAACACTGCCTCCAACTCCTGCCCCTGCACCTTCACCTTTTCAACATCGCCCTCATTTTGGTCGATGGATTCCTAAGAAGCTATTTACAATATTCCATTAA 474 0.4578 MALSPLGMLLVIATILLPFNIVVAKEFVVGDDHGWTIGFDYAAWAADKTFQVGDLLVFKYAVGKHNVFKVNGTAFQSCTIPPASEALTTGSDRIVLAIPGRKWYICGVVGHCNAGQKLVITVQPQTLPPTPAPAPSPFQHRPHFGRWIPKKLFTIFH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1320 157 ProSiteProfiles Phytocyanin domain profile. 25 124 IPR003245 GO:0009055
Gso13g1320 157 Gene3D - 23 127 IPR008972 -
Gso13g1320 157 PANTHER BLUE COPPER PROTEIN-LIKE 10 132 - -
Gso13g1320 157 Pfam Plastocyanin-like domain 35 116 IPR003245 GO:0009055
Gso13g1320 157 CDD Phytocyanin 25 122 - -
Gso13g1320 157 PANTHER BLUE COPPER PROTEIN 10 132 IPR039391 GO:0009055
Gso13g1320 157 SUPERFAMILY Cupredoxins 24 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1320 Gso-Chr13 28622307 28623586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1320 29 139 Miscellaneous Gene Families AT2G26720 46.429 5.26e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1320 - - gmx:102668784 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0302 18 2741994 2743004 Gso13g1320 13 28622307 28623586 GST