Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0280 ATGGGAAAAGGAAACATGGAACTCGAGACAAACAAGGTCTATGACTACGAGGATGCACGAGGGGACGTTGAAGTCCCAGATACCGCTCATCAGATAAGCACTGATTCATGGTTTCAAGTGGCTTTTATCCTCACAACCGGAATCAACAGTGCCTTTGTTCTTGGATATCCAGGGACCGTCATGGTTCCCCTGGGTTGGATCGGGGGTGTGATTGGTCTAATTCTTGCTACCATGGTGTCACTCTATGCAAATGCTCTAATTGCTTATCTCCATGAATTAGGAGGCCAAAGGCACATTAGGTATAGAGATCTTGCTGGATTTATATACGGTAAGAAAGCGTATAATCTCACATGGGTTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTACATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATGTTCTATTCAGGGATGATGGGCTGCTGAAACTTCCATATTGTATTGCCATAGGTGGATTTGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTGGGAATTTGGCTAGGATTTTCAACAGTCTTCAGCCTGGCATATATTGTTATATCATTTGTGTTGTCGCTTAAAGATGGATTACAATCACCGCCTCGAGATTACGAGATTCCAGGAGATGGTGTAAGCAAAATCTTTACAATAATTGGAGCATCTGCTAACCTTGTGTTTGCATTTAATACCGGCATGCTTCCTGAGATACAGGCAACAATTAGGCAACCAGTTGTTAAGAACATGATGAAAGCCTTGTACTTTCAGTTTACCGTTGGAGTTCTACCATTGTACCTGGTTGCCTTTACAGGATACTGGGCTTATGGATCTTCCACAGAAGTGTATTTGCTGAATAGTGTGAATGGTCCAGTTTGGGTGAAGGCTTCTGCCAACATCACAGCCTTTCTTCAATCAGTCATTGCATTGCATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGTGCACTGAATGCTAAAAACTTGTCATTCCGAGTCGTGGTAAGAGGTGGCTACCTAGCCTTTAACACATTTGTGGCGGCTTTCCTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGGGCGATCAGCACATTTCCCCTTACGTTTATTCTTGCAAACCACATGTACCTTAAGGCAAAGAAGGACAAACTAAACAGCTCACAAAAGCTCTGGCACCGGTTCAATATTGGTTTCTTTGCCATTATGTCTCTGGCAGCAACAATTTCAGCCATACGGCTCATTTCTGTAGACTCCAAAACATACCATGTTTTTGCTGATTTGTGA 1332 0.4264 MGKGNMELETNKVYDYEDARGDVEVPDTAHQISTDSWFQVAFILTTGINSAFVLGYPGTVMVPLGWIGGVIGLILATMVSLYANALIAYLHELGGQRHIRYRDLAGFIYGKKAYNLTWVLQYINLFMINTGYIILAGSALKATYVLFRDDGLLKLPYCIAIGGFVCAMFAICIPHLSALGIWLGFSTVFSLAYIVISFVLSLKDGLQSPPRDYEIPGDGVSKIFTIIGASANLVFAFNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVAFTGYWAYGSSTEVYLLNSVNGPVWVKASANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNAKNLSFRVVVRGGYLAFNTFVAAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKKDKLNSSQKLWHRFNIGFFAIMSLAATISAIRLISVDSKTYHVFADL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0280 443 Pfam Transmembrane amino acid transporter protein 34 430 IPR013057 -
Gso18g0280 443 PANTHER PROLINE TRANSPORTER 1 11 438 - -
Gso18g0280 443 PANTHER OS05G0424000 PROTEIN-RELATED 11 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0280 Gso-Chr18 2458741 2461863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0280 61 443 Organic Solute Cotransporters AT2G39890 74.151 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0280 - - gmx:100778997 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0280 18 2458741 2461863 Gso18g0280 18 2458741 2461863 ECH
Gso18g0280 18 2458741 2461863 Gso13g1338 13 28890110 28893142 GST
Gso18g0280 18 2458741 2461863 Gso14g0539 14 5132570 5136507 PCT
Gso18g0280 18 2458741 2461863 Gso2g2155 2 46223706 46227616 PCT
Gso14g0539 14 5132570 5136507 Gso18g0280 18 2458741 2461863 PCT
Gso2g2155 2 46223706 46227616 Gso18g0280 18 2458741 2461863 PCT