Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1338 ATGAGGAAAGGAAACATGGAACTCGAGACAAACAAGGTCTATGACTACGAGGATGCACGCGGGAACGACGCTGAAGTCCCAGATACCGCTCATCAGATTAGCACCGATTCATGGTTTCAAGTGGCTTTTATCCTCACTACCGGAATCAACAGTGCCTTTGTTCTTGGATATCCCGGGACCGTGATGGTTCCCCTGGGTTGGTTCGGGGGTGTGATTGGTCTAATTCTTGCTACCGCTGTATCACTTTATGCAAATGCTCTAGTTGCTTATCTCCATGAATTAGGAGGACAAAGGCACATTAGGTATAGAGATCTTGCTGGATTTATATACGGTAAGAAAGCCTATAATCTCACATGGGTTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTACATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATGTTCTATTCAAGGATGATGGTCTGCTGAAACTTCCATATTGTATTGCCATAGCTGGACTTGTGTGTGCAATGTTTGCCGTCTGCATTCCTCATCTTTCAGCTCTTCGAATTTGGCTAGGATTTTCAACAGTCTTCAGCCTAGCATATATTGTTATATCATTTGTGTTGTCGCTTAAAGATGGATTACGATCACCACCCCGAGATTACGAGATTCCAGGAGAAGGTGTAAGCAAAATATTTACAATAATTGGGGCATCTGCTAACCTCGTGTTTGCATTTAATACTGGCATGCTTCCTGAGATACAAGCAACGATTAAACAACCAGTTGTCAAGAACATGATGAAAGCCTTGTACTTTCAGTTTACCGTTGGAGTTCTACCATTGTACCTTGTTGCCTTTACAGGATACTGGGCTTATGGGTCTTCCACAGAAGTGTATTTGCTGAATAGTGTGAATGGTGCAGTTTGGGTGAAGGCTTTGGCTAATATCACAGCATTTCTTCAATCTGTCATTGCATTACATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGTGCAATGAATGTTAAAAACATGTCATTTCGAATGGTGGTAAGAGGTGGCTACCTGGCCTTTAACACATTTGTGGCGGCTTTCCTGCCATTCCTTGGAGATTTCATGAGCCTCACGGGAGCTATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCACATGTACCTTAAGGCAAAGAAGGACAAACTAAACAGCTCACAAAAGCTCTGGCACTGGCTCAACATTGGTTTCTTTTCCATTATGTCTCTTGCAGCAACAATTTCGGCCATACGGCTCATTGCCATAGACTCCAAAACATTCCATGTTTTTGCAGATTTGTGA 1335 0.4202 MRKGNMELETNKVYDYEDARGNDAEVPDTAHQISTDSWFQVAFILTTGINSAFVLGYPGTVMVPLGWFGGVIGLILATAVSLYANALVAYLHELGGQRHIRYRDLAGFIYGKKAYNLTWVLQYINLFMINTGYIILAGSALKATYVLFKDDGLLKLPYCIAIAGLVCAMFAVCIPHLSALRIWLGFSTVFSLAYIVISFVLSLKDGLRSPPRDYEIPGEGVSKIFTIIGASANLVFAFNTGMLPEIQATIKQPVVKNMMKALYFQFTVGVLPLYLVAFTGYWAYGSSTEVYLLNSVNGAVWVKALANITAFLQSVIALHIFASPMYEFLDTKYGIKGSAMNVKNMSFRMVVRGGYLAFNTFVAAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKKDKLNSSQKLWHWLNIGFFSIMSLAATISAIRLIAIDSKTFHVFADL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1338 444 Pfam Transmembrane amino acid transporter protein 35 430 IPR013057 -
Gso13g1338 444 PANTHER OS05G0424000 PROTEIN-RELATED 17 439 - -
Gso13g1338 444 PANTHER PROLINE TRANSPORTER 1 17 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1338 Gso-Chr13 28890110 28893142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1338 62 444 Organic Solute Cotransporters AT2G39890 74.151 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1338 - - gmx:100784554 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0280 18 2458741 2461863 Gso13g1338 13 28890110 28893142 GST
Gso13g1338 13 28890110 28893142 Gso14g0539 14 5132570 5136507 PCT
Gso13g1338 13 28890110 28893142 Gso2g2155 2 46223706 46227616 PCT
Gso14g0539 14 5132570 5136507 Gso13g1338 13 28890110 28893142 PCT
Gso2g2155 2 46223706 46227616 Gso13g1338 13 28890110 28893142 PCT