Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0273 ATGTCCAGTCCAGCTTCAAAAGCCACTTGGACACCTGGGTTCCATAGAGTATTTGTTGATTTATGCCTTGGAGAAATGCTGAAGAATGAGCCCGGGTCAACACGAATTACCAAGGCAGGTTGGAGGAACATTGTTGGATCCTTTTATGCGAAGACTGGTGTGAGATATGACAAGAAGCAGTTTAAGAATCACTATGATTCTACCAGAAAACTATGGAAAGTCTGGGTCAAGTTGACTGAAGATAGCAACATGAAGTGGGATCCAGAAACGGGGGCATTTGGTGCTTCCGAGGAAGACTGGCAAAATTATGTAAAGGCAATTCCAGAAGCTGCCCAGTTTCAGTCTAAGGAAATCCAGTTTAAAGACAAACTGGATATCATCTTTGATGGAGGGAATCGAATTGAGGAAGTGAAAAGGTGGGCCAATCTCAAGTGGCAGAATGATTCTTCAACTACATCTCCCTTGTGTGGAAGAGAGCGAGAGAAGAAACGCAAGAATTTTGATAGGGATTGTGAATTAGATAGTACCATTGTGGTTGACTATTCGCCAACACCAAAAGCTTCTTGGTCACCTGCATACCATAAAATGTTTGTTGACTTATGCATCGAAGAAACATTGAAGGGGAACAAGTCTGCGACGCATTTTACCAAGGAGGGCTGGAGGAATATTGTTGGATCCTTTAATGCAAAGACTGGTATGAGATATGACAAAAAACAAATTAAGAATCACTATGATTCAACCCGGAAACTATGGAAAATCTGGGCTAAGTTGACTGGTGATGACAACATGAAATGGGACCCCCAAACCAATACTTTTGGTGCTTCTGAGGAAGACTGGCACAATTGTATAAAGGCATTCCCAGAAGCTGCACAATTTCGGTTTAAGGAACTCCAGTTTTCTGACAAATTAAACGTCATCTTTGATGGAGCTATGCCAACTGAGGAAATGATAACAAGGCTTAAGAGGCAGAATGATGCTTCAGCTACATTGCGTGGAAAAGAGCGTGAGAAGAAACGCAGGAATGTTGGTCGGGATTGTGGATTAAAGAGTGCCATTATGGTTAATGCCATCCCAATCAGTACAATTCCAAGTGAGCAGAGCATGTCCAGTTCATCATATACCAAGGTCAAAGCCACGTGGACTCCTACACTGCACAAGATCTTTGTTGATCTATGTATGCAAGAGACATTAAAGGGGAATAAGCCTGGGACACATTTTACAAAGGAAGGTTGGAAGAACATTATGGAATCATTTTATGCAAAAACTGGTGTGAATTATGGTAGACTACAACTTAAGAATCACTGGGATTCTACCAAGGAACAATGGAGAACCTGGTGTAAGCTTATTGGCACCAGTTACATGAAATGGGATCCATCTGACCAGAAGTTTGAGGCTAGTGAAGAAGATTGGACCAACTATTTACAGGAAAACCCAGAAGCTGCACAATTTCGCTATAAGGAACTAAAATTCACTGACCAATTGGAAACCATCTTTAATGGAACTACTGTTACTGGAGAGACTGAACCTGCTGTGCAACAAAGGAAAAGTGACGATAGTGTTGTTACTTTCCCTTTACACATAAAAGAGCCTGATACAGACAACTTCGACGAGAAAGCTGAATGTCATTGTGATGTTGTTGCGTCAAGAAATGGTGTGAGTATTCAGAAGAATGCTAGTGCAGTTTCATCAACTGAAGGTAAACGCAATTATAGTATCGGTGAATGCATTGAATGCCTTGATAGAATGGAAGAAATAGAGCAAGGAAGTGATCTCTACATGTTTGCTTTAGATGTATTCCTTAAGCAGGAATATAGGGAAATTTTTCTGCAGTTGAAAACGCCTAATCTGAGGATCTCGTGGTTGCAGCGGCTTCAGTCTTGTGGTCCACCTCCAGTCTAG 1899 0.415 MSSPASKATWTPGFHRVFVDLCLGEMLKNEPGSTRITKAGWRNIVGSFYAKTGVRYDKKQFKNHYDSTRKLWKVWVKLTEDSNMKWDPETGAFGASEEDWQNYVKAIPEAAQFQSKEIQFKDKLDIIFDGGNRIEEVKRWANLKWQNDSSTTSPLCGREREKKRKNFDRDCELDSTIVVDYSPTPKASWSPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKKQIKNHYDSTRKLWKIWAKLTGDDNMKWDPQTNTFGASEEDWHNCIKAFPEAAQFRFKELQFSDKLNVIFDGAMPTEEMITRLKRQNDASATLRGKEREKKRRNVGRDCGLKSAIMVNAIPISTIPSEQSMSSSSYTKVKATWTPTLHKIFVDLCMQETLKGNKPGTHFTKEGWKNIMESFYAKTGVNYGRLQLKNHWDSTKEQWRTWCKLIGTSYMKWDPSDQKFEASEEDWTNYLQENPEAAQFRYKELKFTDQLETIFNGTTVTGETEPAVQQRKSDDSVVTFPLHIKEPDTDNFDEKAECHCDVVASRNGVSIQKNASAVSSTEGKRNYSIGECIECLDRMEEIEQGSDLYMFALDVFLKQEYREIFLQLKTPNLRISWLQRLQSCGPPPV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0273 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 5 163 - -
Gso18g0273 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 303 631 - -
Gso18g0273 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 182 310 - -
Gso18g0273 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 303 631 IPR045026 -
Gso18g0273 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 5 163 IPR045026 -
Gso18g0273 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 182 310 IPR045026 -
Gso18g0273 632 Pfam Myb/SANT-like DNA-binding domain 188 281 IPR024752 -
Gso18g0273 632 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Gso18g0273 632 Pfam Myb/SANT-like DNA-binding domain 379 473 IPR024752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0273 Gso-Chr18 2410158 2413365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0273 - - gmx:100793529 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0273 18 2410158 2413365 Gso18g0273 18 2410158 2413365 ECH
Gso18g0273 18 2410158 2413365 Gso13g1344 13 28930076 28933174 GST