Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1344 ATGTCCAGTCCAGCTTCAAAAGCCTCTTGGACACCTGAATTCCATAGAATATTTGTTGATTTATGCCTTGGAGAAATGCTGAAGAATGAGCCCGGGTCAATGCGAATTACTAAGGCTGGTTGGAGGAACATTGTTGGATCCTTTTATGCGAAGACAGGTGTGAGATATGACAAAAAGCAATTTAAGAATCACTATGATTCTACCAGAAAACTATGGAAAGTCTGGGTCAAGTTGACTGATGATAGCAACATGAAGTGGGATCCAGAAATGCGGACGTTTGGTGCTTCCGAGGAAGACTGGCAAAATTACGTAAAGGCAATTCCAGAAGCTGCCCAGTTTCAGTCTAAGGAAATCCAGTTTAAAGACAAACTGGATATCATCTTTGATGGAGGGAATCGAATTGAGGAAGTGAAAAGGTGGGCCAGTGTCAAGTGGCAGAATGATGCTTCAGCTACATCTCCCTTGTGTGGAAGAGAGCGAGAGAAGAAACACAAGAATTTTGATAGGGATTGTGAATCAGATAGTACCATTATGGTTGACTATTCACCAACACCAAAAGCTTCTTGGTCACCTGCATACCATAAAATGTTTGTTGACTTATGCATTGAAGAAACATTGAAGGGGAACAAGTCTGCGACGCATTTTACCAAGGAGGGCTGGAGGAATATTGTTGGATCCTTTAATGCAAAGACTGGTATGAGATACGACAAAAAACAAATTAAGAATCACTATGATTCAACCCGGAAACTATGGAAAATCTGGGCTAAGTTGACTGGTGAGGATAACATGAAATGGGACCCCCAAACCAAAACGTTTGGTGCTTCTGAGGAAGGCTGGCACAATTGTCTAAAGGCATTCCCAGAAGCTGTACAATTTCGGTTTAAGGAACTCCAGTTTTCTGACAAATTAAACGTCATCTTTGATGGAGCTATGCCAACTGAGGAAATGATAACAAGGCTTAAGAGGCAGAATGATGCTTCAGCTACATTGCATGGAAGAGAGCATGAGAAGAAACGTAGGAATGTTGGTCGGGATTGTGGATTAAAGAGTGCCATCATGGTTAATGCCATCCCAATCCGCACAATTCCAAGTGAGCAGAGCATGTCCAGTTCATCATATACCAAGGTCAAAGCCGCATGGACTCCTACACTGCACAAGGTCTTTGTTAATCTATGTATGCAAGAGACATTAAAGGGGAATAAGCCTGGCACACATTTTACAAAGGAAGGTTGGAAGAACATTATGGAATCATTTTATGCAAAAACTGGTTTGAATTATGGTAGATTACAACTTAAGAATCACTGGGATTCTACCAAGGAACAATGGAGAACTTGGTGTAAGCTTATTGGCACCAGTTACATGAAATGGGATCCATCTGACCAGAAGTTTGAGGCTGGTGAAGAAGATTGGACCAACTATTTACAGGAAAATCCAGAAGCTGCACAATTTCGCTATAAGGAACTACAATTCACTGACATATTGGAAACCATCTTTAATGGAACTACTGTTACTGGAGAGACTGAACCTGCTGCGCAACAAAGGAAAAGTGAGGGTAGTGTTATTACTTTCCCTTTAGACACAAAAGAACCTGATACAGACAACTTAGACGAGAAAACTGAATGTCATTGTGATGCTGTTGCATCAAGAAATGGTGTGAGTATTCAGAAGAATGCTAGTGCAGTTTCATCCACCGAAGGCAAACACAATTATAGTATCGGTGAATGCATTGAATGCCTTGATAGAATGGAAGAAATAGAGCAAGGAAGTGATCTCTACATGTTTGCTTTAGATGTATTCCTTAAGCAGGAATATAGGGAAATTTTTCTGCAGTTGAAAACGCCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTGGTGGTCCACCTCCAGTCTAG 1899 0.4128 MSSPASKASWTPEFHRIFVDLCLGEMLKNEPGSMRITKAGWRNIVGSFYAKTGVRYDKKQFKNHYDSTRKLWKVWVKLTDDSNMKWDPEMRTFGASEEDWQNYVKAIPEAAQFQSKEIQFKDKLDIIFDGGNRIEEVKRWASVKWQNDASATSPLCGREREKKHKNFDRDCESDSTIMVDYSPTPKASWSPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKKQIKNHYDSTRKLWKIWAKLTGEDNMKWDPQTKTFGASEEGWHNCLKAFPEAVQFRFKELQFSDKLNVIFDGAMPTEEMITRLKRQNDASATLHGREHEKKRRNVGRDCGLKSAIMVNAIPIRTIPSEQSMSSSSYTKVKAAWTPTLHKVFVNLCMQETLKGNKPGTHFTKEGWKNIMESFYAKTGLNYGRLQLKNHWDSTKEQWRTWCKLIGTSYMKWDPSDQKFEAGEEDWTNYLQENPEAAQFRYKELQFTDILETIFNGTTVTGETEPAAQQRKSEGSVITFPLDTKEPDTDNLDEKTECHCDAVASRNGVSIQKNASAVSSTEGKHNYSIGECIECLDRMEEIEQGSDLYMFALDVFLKQEYREIFLQLKTPNLRISWLQRLQSGGPPPV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1344 632 Pfam Myb/SANT-like DNA-binding domain 188 281 IPR024752 -
Gso13g1344 632 Pfam Myb/SANT-like DNA-binding domain 380 473 IPR024752 -
Gso13g1344 632 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Gso13g1344 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 5 164 IPR045026 -
Gso13g1344 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 163 310 IPR045026 -
Gso13g1344 632 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 304 631 IPR045026 -
Gso13g1344 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 5 164 - -
Gso13g1344 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 163 310 - -
Gso13g1344 632 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 304 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1344 Gso-Chr13 28930076 28933174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1344 - - gmx:100798126 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0273 18 2410158 2413365 Gso13g1344 13 28930076 28933174 GST