Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0267 ATGACGTCATCGCGTCCCCCTCCGTCGAAATCCGTGGATCTGGACCTAACAATCGTGTCGGCGAAGCACCTGAAGAACGTGAACTGGAAGAACGGCAATCTGAAACCCTACGTGGTTTTCTGGGTGGACCCGGAGCGGCGCCTCGCCACGAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGTTTCGCCCTCCCTCTCCCTCTCCCCCTCCACGACTCCTTCCTCACCCTCGAGATCTTTCACTCCAAACCCTCCGACACCCCCAAACCCCTCGTCGCCACCCTCCGCCTCCCCCTCAAAGACCTCCACGACCTCCACGACTCCACGCGCCTCCGCAAGTTCCCCCTCTCTCGCCCCTCTGGCCGCCCCCACGGCAAGATCCACCTCAAACTCGGCCTCCTCGGCCGCCCCCAATTCGATTACGCCTCCCCCAACCCTAACCCTAGTCCTAATTTCGTCTGCTACAGAGGATACACCCCTTCCCCTTCCCATTCCCATTCTCACTCCCCTTCTCCACCACCTTCTCCTTACACCTCTTACACCGACTCCTATTCTGGTTACTACCCCGGTTACTATTCTGGCGCACCTCCCCCTCCCCCTCCTAGACCCTTCTTCGACCGTTACGCTGGGTCTAGTGGGCCTTCTGCTCCGCTTGATTACTCCTCCACTTATGACTCCAAGCCCAAGGCTCCCAAAATGGGCCTCGGCGCTGGCCTCGCCGTTGGCGCTGTTGCTGGGGCTCTCGGCGGGCTTGCTCTCGAAGAGGGGCTTAATTACGAAGAGGACAAAATCGCGGAGAGGGTTGAGAACGACGTCACTGCTGCTAATGTTGCTGCTGCGCGCGACAATTACAGCGATTACCGAGTGGATTATTGA 888 0.5957 MTSSRPPPSKSVDLDLTIVSAKHLKNVNWKNGNLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHDSFLTLEIFHSKPSDTPKPLVATLRLPLKDLHDLHDSTRLRKFPLSRPSGRPHGKIHLKLGLLGRPQFDYASPNPNPSPNFVCYRGYTPSPSHSHSHSPSPPPSPYTSYTDSYSGYYPGYYSGAPPPPPPRPFFDRYAGSSGPSAPLDYSSTYDSKPKAPKMGLGAGLAVGAVAGALGGLALEEGLNYEEDKIAERVENDVTAANVAAARDNYSDYRVDY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0267 295 PANTHER INGRESSION PROTEIN FIC1 8 291 - -
Gso18g0267 295 SMART C2_3c 13 115 IPR000008 -
Gso18g0267 295 Gene3D C2 domain 3 138 IPR035892 -
Gso18g0267 295 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Gso18g0267 295 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 291 - -
Gso18g0267 295 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Gso18g0267 295 Pfam C2 domain 13 108 IPR000008 -
Gso18g0267 295 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0267 Gso-Chr18 2367552 2370829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0267 - - gmx:102666594 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0267 18 2367552 2370829 Gso18g0267 18 2367552 2370829 ECH
Gso18g0267 18 2367552 2370829 Gso13g1352 13 28992677 28993912 GST