Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1352 ATGGCGTCATCTCGTCCCCCTCCTTCGAAATCCGTGGATCTGGACCTAACAATCGTGTCGGCGAAGCACCTGAAGAACGTGAACTGGAAGAACGGCGATCTGAAACCCTATGTGGTTTTCTGGGTGGACCCCGAGCGGCGCCTGGCCACGAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGTTTCGCCCTCCCTCTCCCTCTCCCCCTCCACGACTCCTTCCTCACGCTCGAGATCTTCCACTCCAAACCCTCCGACACCCCCAAACCCCTCGTCGCCACCCTCCGCCTCCCCCTCAAAGACCTCCACGACTCAACTCGCCTCCGCAAGTTCCCCCTCTCCCGCCCCTCCGGCCGCCCTCACGGCAAGATCCACCTCAAACTCGGCCTCCTCGGCCGCCCCCAATTCGATTACGCCTCCCTCAACACTAACCCTAACCCTAATTTCGTCTGCTACAGAGGATACACCCCTTCCCATTCCCCTTCTCCACCAGCCTCTCCTTACACATCATACACCTCTTACACTGACTCCTATTCTAATTACTACCCCGCTTACTATTCTGGCGCTCCTCCCCCTCCCCCTCCTAGACCCTTCTTCGACCGTTACGCTGGGCCCAGTGGGCCTTCTGCTCCGCTTGATTACTCCTCCACTTATGACCCCATGCCCAAGCCTCCCAAAATGGGCCTCGGCGCTGGCCTCGCCATTGGCGCTGTTGCTGGGGCTCTCGGCGGGCTTGCTCTCGACGAGGGCCTTAACTACGAAGAGGACAAGATCGCCGAGAGGGTCGAGAACGACGTCGCTGCTGCTGCGCGCGACGATTACAGCGATTACCGAGTGGATTATTGA 858 0.5991 MASSRPPPSKSVDLDLTIVSAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHDSFLTLEIFHSKPSDTPKPLVATLRLPLKDLHDSTRLRKFPLSRPSGRPHGKIHLKLGLLGRPQFDYASLNTNPNPNFVCYRGYTPSHSPSPPASPYTSYTSYTDSYSNYYPAYYSGAPPPPPPRPFFDRYAGPSGPSAPLDYSSTYDPMPKPPKMGLGAGLAIGAVAGALGGLALDEGLNYEEDKIAERVENDVAAAARDDYSDYRVDY* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1352 285 CDD C2_SRC2_like 13 130 IPR044750 GO:0006952
Gso13g1352 285 Gene3D C2 domain 3 135 IPR035892 -
Gso13g1352 285 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 281 - -
Gso13g1352 285 SMART C2_3c 13 115 IPR000008 -
Gso13g1352 285 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 136 IPR035892 -
Gso13g1352 285 Pfam C2 domain 13 113 IPR000008 -
Gso13g1352 285 PANTHER INGRESSION PROTEIN FIC1 8 281 - -
Gso13g1352 285 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1352 Gso-Chr13 28992677 28993912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1352 - - gmx:102662889 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0267 18 2367552 2370829 Gso13g1352 13 28992677 28993912 GST