Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0222 ATGGCGAACGTGGATGAACTTTTATCTTCCTTAATCTCAGACGTCCATGCCTACACCGGCAAAGACCCTCTTCTTCCATGGCTTCGCGCGATCCGAAAGGTGAAGGACACTCTTCCTCCCAAAACCCTAAAGGAAAAGTTACCCGCGTTCCTGCAGAAATGCGCACACACCTTCGAGCTCGATCGGCGTTACAGAAACGACATGCGCTATCTTCGGGTTTGGCTCCACCTGATGGATTTTGTGGATGATCCAAAAACACTTTTGAGAACGATGGAGACTAATCACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCTCTTTACTACGAGAAGAGCAAGAAGAGCGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGGATGGAGCGAAAAAATAATAAGAGAATCCAGCATCAGGAAGCAAAAGCTTCCAGGAGGCCTCTGTCTTTAAAGAGCTTCCCTTCTCTTGACAACAAAACTGAGGGAAGCAAAAGCAATGGAGTAGACTGTGTTGAGGGTGTGCAAAAGGGACCCCGAATTGATAATTATGCAGCTAAAGGTGTGGCTGATGATAAAAACATAAAGACTAAGAAGGATGAGCGCAAGAGATTTTGTGGTGATGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAACATGTTCCGGGAGCCATTGGAGACTGTTCCATTAGGCAAGAAATCACATAAAAACCATTCAAAAGAAGATCGTAGTACAAAGAACGAGTTTGAGGTTTTGGTTGATGAAAACTTGGACAATGGAATCAAACCATCCGGTTCCTTGTCACTTCGGAACAGGACTGAAGCTAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGATGAAGAGACTTCTGAGACCAGTGATGTGAATTTGTTTGAAGGTGGTTGTACTTCATCGGCTTCACAACCAAATGGCTTTGTTTTTCTACGCTCCAAGGATATTCCTTCTAAAAAATCTAGTGATATGGATGCTGATAGCGATCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCCGCCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGACCCCACCATCAACTTGAAAGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAACCACCACCAAGCAGGAGAAGGCCCACCAGAGCATTAGGGGAAATGACATTGGTGGGTTTTCAATCCTTGCTGATGATGAGCTCCAGGAACAAGAAGTTCCACCTCCACCACCACCAAAATTGCTAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTATCCTCACAAAGGAAGCCATAGATGATATAAACAAGATGTTTAACATGCCTCTGGATTTTTAG 1569 0.4328 MANVDELLSSLISDVHAYTGKDPLLPWLRAIRKVKDTLPPKTLKEKLPAFLQKCAHTFELDRRYRNDMRYLRVWLHLMDFVDDPKTLLRTMETNHIGTKRCEFYQAYALYYEKSKKSDEAEKMYHLGVKNLAEPLDKLQKSYEQFLQRMERKNNKRIQHQEAKASRRPLSLKSFPSLDNKTEGSKSNGVDCVEGVQKGPRIDNYAAKGVADDKNIKTKKDERKRFCGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINNMFREPLETVPLGKKSHKNHSKEDRSTKNEFEVLVDENLDNGIKPSGSLSLRNRTEASQPHQEPLQIYIDDEETSETSDVNLFEGGCTSSASQPNGFVFLRSKDIPSKKSSDMDADSDRNSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRTTTKQEKAHQSIRGNDIGGFSILADDELQEQEVPPPPPPKLLGKSKESDLFEPTILTKEAIDDINKMFNMPLDF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0222 522 MobiDBLite consensus disorder prediction 477 496 - -
Gso18g0222 522 MobiDBLite consensus disorder prediction 312 331 - -
Gso18g0222 522 Coils Coil 135 162 - -
Gso18g0222 522 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 522 IPR015661 GO:0007094
Gso18g0222 522 MobiDBLite consensus disorder prediction 153 193 - -
Gso18g0222 522 PANTHER OS11G0128700 PROTEIN 4 522 - -
Gso18g0222 522 Pfam Mad3/BUB1 homology region 1 13 128 IPR013212 -
Gso18g0222 522 MobiDBLite consensus disorder prediction 172 186 - -
Gso18g0222 522 Gene3D - 9 166 - -
Gso18g0222 522 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Gso18g0222 522 MobiDBLite consensus disorder prediction 311 335 - -
Gso18g0222 522 SMART mad3_bub1_i 4 128 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0222 Gso-Chr18 1908852 1911524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0222 - - gmx:100783816 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0222 18 1908852 1911524 Gso18g0222 18 1908852 1911524 ECH
Gso18g0222 18 1908852 1911524 Gso13g1399 13 29519861 29523462 GST