Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1399 ATGGCGAACGTGGATGAACTCTTATCTTCCTTAATCTCAGACATCCATACCTACACCGGCAAGGACCCTCTTCTTCCCTGGCTTCGCGCGATCCGAAAGGTGAAGGACACGCTTCCACCCAAAACCCTAAAGGAAAAACTACCCGCGTTCTTGCAGAAATGCGCACATACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATCTTCGGATTTGGCTCCATCTGATGGATTTCGTGGATGATCCAAAAACGCTTTTGAGAACCATGGAGGTTAATCACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCGCTTTACTACGAGAAGAGCAAGAAGTACGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTGTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGGATGGAGCGAAAAAACAATAAGAGAATTCAGCATCAGGAAGCAAAAGGTGCCAGGAGGCCTCTGTCTACAAAAAGCTTCCCTTCTCTTGACAACAAGACTGAGGGAAGCAAAAGCAATGGAGCATGCTGTGTTGAGGGTGGTGTGCAAAAGGGACCCCGAATTGATAATTATGCAGCTAAAGGTGTAGCTGATGATAAAAACGTAAAGACCAAGAAGGATGAGCGCAAGAGATTTCATGGAGACGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGACGCATGCCATCATGGATTAGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGAACCGTTAGAGACTGTTCTATTAGGCAGGAAATCACATAAAAACCATCCAAAAGAAGATCCTAGTACAAAGAACGAATTTGAGGTTTTTGTTGATGAAAACATGGATCATGGAATCAAACCATCAGGTTCCTTGTCACTTCAAAACAGGACTGAAGCTAGCCAACCTCACCCAGAACCGCTCCAGATATACGTTGATGATGAAGAAAATTCCGAGACCAGTGATGTGAATGTGAATCTGTTTGAAGGTAGTAGTACTTCATCGGCTTCACAACCAAATGGTTTTGTTTTTCTACGCCCCAAGGATATTCCTTCTGAAAAATCTAGTGATATGGATGCTGACATCGGTCGTAATTCAAAGTTCAGAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGACCCCACCATCAACTTGAAGGAAGCTATGGATGATATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAGAAGAACCACCACCAAGCAAGAGAAAGCCCCCCAGAGCAATAGGGGAAATGACTTTGGTGGGTTTTCAATCCTTGTTGATGATGAGCACCCGGTGCAACAAGTTCCACAACCACCACCACCAAAATTGCAAGAAAAATCCAAGGAATCTGATTTGTTTGAGCCAACTATGCTCACAAAGGAAGCCATAGACGATATAAACAAGATGTTTAACATGCCTCTGGATTTTTAG 1581 0.4333 MANVDELLSSLISDIHTYTGKDPLLPWLRAIRKVKDTLPPKTLKEKLPAFLQKCAHTFELDRRYRNDMRYLRIWLHLMDFVDDPKTLLRTMEVNHIGTKRCEFYQAYALYYEKSKKYDEAEKMYHLGVKNLAEPVDKLQKSYEQFLQRMERKNNKRIQHQEAKGARRPLSTKSFPSLDNKTEGSKSNGACCVEGGVQKGPRIDNYAAKGVADDKNVKTKKDERKRFHGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVLLGRKSHKNHPKEDPSTKNEFEVFVDENMDHGIKPSGSLSLQNRTEASQPHPEPLQIYVDDEENSETSDVNVNLFEGSSTSSASQPNGFVFLRPKDIPSEKSSDMDADIGRNSKFREDTVVCRFVGSAILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRRTTTKQEKAPQSNRGNDFGGFSILVDDEHPVQQVPQPPPPKLQEKSKESDLFEPTMLTKEAIDDINKMFNMPLDF* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1399 526 Gene3D - 9 165 - -
Gso13g1399 526 Coils Coil 135 162 - -
Gso13g1399 526 MobiDBLite consensus disorder prediction 453 505 - -
Gso13g1399 526 MobiDBLite consensus disorder prediction 315 330 - -
Gso13g1399 526 SMART mad3_bub1_i 4 128 IPR013212 -
Gso13g1399 526 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Gso13g1399 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 526 IPR015661 GO:0007094
Gso13g1399 526 MobiDBLite consensus disorder prediction 313 333 - -
Gso13g1399 526 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Gso13g1399 526 PANTHER OS11G0128700 PROTEIN 4 526 - -
Gso13g1399 526 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1399 Gso-Chr13 29519861 29523462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1399 - - gmx:100806627 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0222 18 1908852 1911524 Gso13g1399 13 29519861 29523462 GST