Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0214 ATGATTCCTTGGCTTCTGGGAGCAGCCTATATAAATCGCCAATTCTTAATAAGCGTCCGACACATCCTACGTTTCTTTGTTGGAGCAATTCAGACACTGTACCCATTCGTGATCATGTCCAACCCCAAATCAGAGTCAGTAGTGTCTGAACCCTCTGCTTCGGAACCTTCAATACCCATTTCATATCCAATAAAAACTCTTGAGGACTTGGAGTCTCGCTCCTATTTCGAGTCCTTTCACTACCCTTTCAACAAAGCTTCTTCTTCGGTCAACAATTCTTCTTCTTCTTCGTTGCCCAACAGGCGCAGATTGCTTGTGTGCCATGACATGGCTGGGGGCTACTTGGATGATAAGTGGATTCAAGGTGGCACTAACCCTGATGCTTATGCCATCTGGCATTGGCATTTGATCGATGTCTTTGTCTACTTTTCACACTCCCTCGTTACTCTTCCTCCTCCTTCGTGGACCAACGCTGCTCATCGCCATGGTGTTAAGGTGTTGGGGACTTTCATCACTGAATGGGATGAGGGAAAGGCTGTCTGTGATACACTGCTTTCGACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCTGCTGATCTAGGCTTTGATGGGTGGCTAATAAATATGGAAGTAAATTTGGATCTCGGTCAAATTTCTAATTTGAAAGAGTTTGTAGAGCACTTATCGTTGAGAATGCATTCTTCTGTGCCTGGATCATTAGTGATATGGTATGACAGTGTTACACTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACATAATAAGCCCTTCTTTGATATATGTGATGGAATATTTGTGAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCAGTGATCGGAAGTTTGATGTGTACATGGGCATTGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAAATGTTGCTCTTGATGTAATAAGAAAGAATGATGTCTCTGCTGCAATATTTGCTCCTGGCTGGGTCTATGAGACAAAGCAACCACCAAATTTTGAGACTGCTCAGAATAGTTGGTGGGGTCTTGTGGAAAAGTCATGGGGAATACTGCAAAAACTTCCTGGAGTACTACCATTCTACACTAATTTTGATCAGGGACGTGGTTATCATATTTCAGTCGATGGCGATAATGTATCAGATGCCACTTGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCCTTGAGTCTTCTGATCCAACAAATTCTATTCAAGTTTCTGTAGACTTGAAGGAGGCATCATATAGTGGAGGAGGAAACATTACATTCAAAGGATCCCTTGAAGAGCAAACTTACTATGAGAGCAAAATCTTTCAAGGAGAGTTTCTTCTGACCAATTTGCCTATCCACTTTATTTATTCTGTGAAATCTGATGGCAATTCTTCATTGGGACTTAAGCTTGAGTTCACTTCCGGCGACCAAAGAGCATCTGTGCTTCTCACATCCCGGGCAGTGAATCGTTTCTCAAGCAAATTCAGCAAAGTAATCATGACACGTGAGCACAAGGGATTATCCTCTGGATGGGTTATAAATGAAGGTGTAGTTGCAATGAATGGATACACTTTAACAGAAATTCATGCAGCGTGCTATAGATCAAATGGCAACGATGAAACTGTGGCTTCCCCATCAGATTATTTTGCACTTCTTGGCCATATCACAATCAAGACTTCTGACTATAAGTCAGATTTTCCTGTGTCTTCTTCCTGGCTAGTTGATGGCAGCTACATAAAATGGACATCAGACCCTCTGGGTTCAAAGACCCTTGATCTTAAAATTTCTTGGAAACTAAAAAATGGACAGAATTTTCTATTTCTGAAGTACAACGTGTACTTGGTGAAATTATCAAAACAAGCAGATGGTAATCCAGGTACAACATTAGAGGATGTGAAGGAGTACCTTGGAGTAGCACAAGTAAACTGTTTTTATGTTTCTGACCTCGAAGTTCCTTCTGACACTTCTAGTCTCAAATTTATAATACAAGTCTGCGGTGTAGATGGGACATTTCAAGAATTGGATGAGTCTCCATATTATCAATTGGAGGTTGAAGATCCCTAA 2118 0.4155 MIPWLLGAAYINRQFLISVRHILRFFVGAIQTLYPFVIMSNPKSESVVSEPSASEPSIPISYPIKTLEDLESRSYFESFHYPFNKASSSVNNSSSSSLPNRRRLLVCHDMAGGYLDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNAAHRHGVKVLGTFITEWDEGKAVCDTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDLGQISNLKEFVEHLSLRMHSSVPGSLVIWYDSVTLDGKLNWQDQLNEHNKPFFDICDGIFVNYTWKEDYPRLSAAVASDRKFDVYMGIDVFGRNTYGGGQWNVNVALDVIRKNDVSAAIFAPGWVYETKQPPNFETAQNSWWGLVEKSWGILQKLPGVLPFYTNFDQGRGYHISVDGDNVSDATWCNISCQGFQPLLESSDPTNSIQVSVDLKEASYSGGGNITFKGSLEEQTYYESKIFQGEFLLTNLPIHFIYSVKSDGNSSLGLKLEFTSGDQRASVLLTSRAVNRFSSKFSKVIMTREHKGLSSGWVINEGVVAMNGYTLTEIHAACYRSNGNDETVASPSDYFALLGHITIKTSDYKSDFPVSSSWLVDGSYIKWTSDPLGSKTLDLKISWKLKNGQNFLFLKYNVYLVKLSKQADGNPGTTLEDVKEYLGVAQVNCFYVSDLEVPSDTSSLKFIIQVCGVDGTFQELDESPYYQLEVEDP* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0214 705 CDD GH85_ENGase 105 415 - -
Gso18g0214 705 Gene3D - 377 575 - -
Gso18g0214 705 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 8 704 - -
Gso18g0214 705 Gene3D Glycosidases 53 372 - -
Gso18g0214 705 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 8 704 IPR032979 GO:0033925
Gso18g0214 705 Pfam Glycosyl hydrolase family 85 114 391 IPR005201 GO:0005737|GO:0033925
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0214 Gso-Chr18 1842549 1849835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0214 54 703 Glycoside Hydrolase AT5G05460 56.687 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0214 K01227 - gmx:100804658 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0214 18 1842549 1849835 Gso13g1407 13 29576066 29583690 GST