Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1407 ATGCTTAAGCTTAAGAACAACAAGAAGCATCATGTTCATAGAAAAAGTGAAGTTAGCGTAACAAAGAGTTGGTGTGCAATGATTCCTTGGCTTTTGGGAGCAGCCTATATAAATCGCCAATTCTTAATAAACGTTCGAAACATCCTACTTTTCTTTCTTGACGCAATTCAGACACCGTTCCTATTCTTGATCTTCATCATGTCCAATCCCAAATCCGAGTCAGTAGTGTCTGAACCCTCTGATTCGGAACCTTCAATACCCATTTCGTATCCAATAAAAACTCTTTCGGAGTTGGAGTCTCGCTCGTATTTTGAGTCCTTTCACTACCCTTTCAACAAAGCTTCTTCTTCGGTGAACAATTCTTCTTCTTCCTTGCCCAACAGGCGCAGATTGCTCGTGTGTCATGACATGGCTGGGGGCTACTTGGATGACAAGTGGGTCCAAGGTGGCACCAACCCCGATGCTTATGCCATCTGGCATTGGCATTTGATCGATGTATTTGTTTACTTTTCGCACTCCCTCGTTACTCTTCCTCCTCCTTCCTGGACTAACACTGCTCATCGCCATGGTGTCAAGGTGTTGGGGACTTTCATCACCGAATGGGATGAGGGAAAGGCTGTCTGTGATACAATGCTTTCGACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCTGCTGATTTAGGCTTTGATGGGTGGCTAATAAATATGGAAGTAAATTTGGATCCGGGTCAAATTTCTAATTTGAAAGAGTTTGTAGCCCATTTATCATTAACAATGCATTCTTCTGTGCCAGGATCATTAGTGATATGGTATGACAGTGTTACAGTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACACAATAAGCCATTCTTTGATATATGTGATGGAATATTTGTGAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCAGTGATCGAAAGTTTGATGTGTACATGGGAATTGATATATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAAATGTTGCTCTTGATGTAATAAAAAAGAATGATGTCTCTGCTGCAATATTTGCTCCTGGCTGGGTCTATGAGACAAAGCAACCACCAGATTTTCAGACTGCTCAGAATAGTTGGTGGGGTCTTGTGGAAAAGTCATGGGGAGTACTACAAAAACTACCTGGAGTACTACCATTCTACACTAATTTTGATCAGGGACGTGGTTATCATATTTCAGTTGATGGTGATAATGTATCAGATGCTACATGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCCTTGAGTCTGTTGATCCGACAAACTCTATTCAAGTTTCTGTAGACTTGAAGGAAGCATCATACAGTGGAGGGGGAAACATTACATTCAAAGGATCCCTTGAAGAGCAAACTTACTATGAGAGCAAAATCTTTCAAGGAGAGTTTCTTCTGAACGATTTGCCTATCCACTTTATTTATTCTGTGAAATCTGATGGTAATTCTTCATTGGGACTTAAGCTTGAGTACACTTCCACCAGCAACAAAAGAGCATCTGTACTTCTCACATCCCGGGCTGTGAATCGTTTCTCAAGCAAATTCAGCAAAATAGTTATGACACGTGAACATAAGGGATTATCCTCTGGATGGGTTATAAATGAAGGTGTGGTTGCAATGAATGGATACACTTTAACAGAAATCCATGCAGTGTGCTATGGATCAAATGACAATGATGAAACTTTGGCTTCCCCATCAGATTATTTTGCACTTCTTGGTCATATTACAATCAAGACTTCTGACTATAAGTCATATTTTCCTGTGTCTTCTTCCTGGCTAGTTGATGGAAGCTGCATAAAATGGACATCAGATCCTCTGGGTTCAAAGACCCTTGATGTTAAAATTTCTTGGAAACTAAAAAATGGACAGAATTTTCTATTTCTAAAGTACAACGTATACTTGGTGAAATTATCAAAACAAGATGTAGGTATAACATTAGAGGATGTGAAGGAGTACCTTGGAGTAGCACAAGTAAACTGTTTTTATGTTTCTGACCTTGAAGTTCCTTCTGACACTTCTAGTCTCAAATTTATAATACAAGTCTGTGGGGTAGATGGGACAATTCAAGAATTGGATGAGTCTCCATATTATCAATTGGAGGTTGAAGATCCCTAA 2193 0.4013 MLKLKNNKKHHVHRKSEVSVTKSWCAMIPWLLGAAYINRQFLINVRNILLFFLDAIQTPFLFLIFIMSNPKSESVVSEPSDSEPSIPISYPIKTLSELESRSYFESFHYPFNKASSSVNNSSSSLPNRRRLLVCHDMAGGYLDDKWVQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFITEWDEGKAVCDTMLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDPGQISNLKEFVAHLSLTMHSSVPGSLVIWYDSVTVDGKLNWQDQLNEHNKPFFDICDGIFVNYTWKEDYPRLSAAVASDRKFDVYMGIDIFGRNTYGGGQWNVNVALDVIKKNDVSAAIFAPGWVYETKQPPDFQTAQNSWWGLVEKSWGVLQKLPGVLPFYTNFDQGRGYHISVDGDNVSDATWCNISCQGFQPLLESVDPTNSIQVSVDLKEASYSGGGNITFKGSLEEQTYYESKIFQGEFLLNDLPIHFIYSVKSDGNSSLGLKLEYTSTSNKRASVLLTSRAVNRFSSKFSKIVMTREHKGLSSGWVINEGVVAMNGYTLTEIHAVCYGSNDNDETLASPSDYFALLGHITIKTSDYKSYFPVSSSWLVDGSCIKWTSDPLGSKTLDVKISWKLKNGQNFLFLKYNVYLVKLSKQDVGITLEDVKEYLGVAQVNCFYVSDLEVPSDTSSLKFIIQVCGVDGTIQELDESPYYQLEVEDP* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1407 730 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 34 729 - -
Gso13g1407 730 Gene3D - 404 589 - -
Gso13g1407 730 Pfam Glycosyl hydrolase family 85 141 418 IPR005201 GO:0005737|GO:0033925
Gso13g1407 730 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 34 729 IPR032979 GO:0033925
Gso13g1407 730 Gene3D Glycosidases 80 400 - -
Gso13g1407 730 CDD GH85_ENGase 132 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1407 Gso-Chr13 29576066 29583690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1407 82 728 Glycoside Hydrolase AT5G05460 56.860 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1407 K01227 - gmx:100806475 1445.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0214 18 1842549 1849835 Gso13g1407 13 29576066 29583690 GST