Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0198 ATGGGAAAATATCTTGAATCTGCGGCGAGGCTGGCGGAGCTATCGCGGATTGTGTCATCTGCTGCGAAGCCCAACAGGCCAAAGAGAGCGCTACCCAGATCGCCCAACCGTGTGGCGACTCCTCGAAGTGCGAACCCATTTGGTGTTAAGGTCGAACCTGCGAAAAAGATGGAACCTTTGGAAGAAGAACAACAATGTCGGACACCCCTCGCCAAGGTTGTCTCAGATTGCTCCAAGCGCTGGTTCCAGGACACCCTCAAGGAGGCTAAGGCTGGGGACACTACCATGCAGGTTTTGGTTGGTCAAATGTATTACTCTGGATATGGTGTTGCGAGGGATCCCCAAAAGGGGCATGCTTGGATTAGTAAAGCATCAAGGAACCGAAATTCAGTTTGGAAATTGTGCGGTAAACGGCCAGGTTACAGAGCAAGTGATTCTGATTCATGTGAACTGGAGGAAAAAGATAAATATTTTCCTTAA 480 0.4938 MGKYLESAARLAELSRIVSSAAKPNRPKRALPRSPNRVATPRSANPFGVKVEPAKKMEPLEEEQQCRTPLAKVVSDCSKRWFQDTLKEAKAGDTTMQVLVGQMYYSGYGVARDPQKGHAWISKASRNRNSVWKLCGKRPGYRASDSDSCELEEKDKYFP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0198 159 MobiDBLite consensus disorder prediction 17 51 - -
Gso18g0198 159 PANTHER EXPRESSED PROTEIN 1 156 - -
Gso18g0198 159 Gene3D Tetratricopeptide repeat domain 45 134 IPR011990 GO:0005515
Gso18g0198 159 SUPERFAMILY HCP-like 86 127 - -
Gso18g0198 159 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 156 - -
Gso18g0198 159 SMART sel1 94 129 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0198 Gso-Chr18 1715411 1716987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0198 - - gmx:100779520 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0198 18 1715411 1716987 Gso18g0198 18 1715411 1716987 ECH
Gso18g0198 18 1715411 1716987 Gso13g1420 13 29701033 29702768 GST