Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1420 ATGGGAAAATATCTTGAATCTGCGGCGAGGTTGGAAGAGCTATCGCGGATTGTGTCATCTGCTGCGAAGCCCAATAGGTCAAAGGGAACGCTACCCAGATCGCCCAACCGTGTTGCCACTCCTCGAATTGCGAACCCAATTGGTGTTAAGGTCGAACCTGCGAAAAAGATGGAACCTTTGGAATGTCGGACACCCCTCGCCAAGGTTGTCGCAGATTGCTCCAAGCGCTGGTTCCAGGACACCCTCAAGGAGGCCAAGGCTGGGGACTCTGCCATGCAGGTTTTGGTTGGCCAAATGTATTACTCTGGATATGGTGTTCCAAGGGATCCTCAAAAGGGGCATGTTTGGATTAGTAAAGCATCAAGAAATCGAAATTCAGTTTGGAAAGTGTGCGGTAAACGGCCAGGATACAGAGCAAGCGATTCTGATTCATGA 435 0.5011 MGKYLESAARLEELSRIVSSAAKPNRSKGTLPRSPNRVATPRIANPIGVKVEPAKKMEPLECRTPLAKVVADCSKRWFQDTLKEAKAGDSAMQVLVGQMYYSGYGVPRDPQKGHVWISKASRNRNSVWKVCGKRPGYRASDSDS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1420 144 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 144 - -
Gso13g1420 144 SMART sel1 90 125 IPR006597 -
Gso13g1420 144 MobiDBLite consensus disorder prediction 19 44 - -
Gso13g1420 144 SUPERFAMILY HCP-like 82 123 - -
Gso13g1420 144 MobiDBLite consensus disorder prediction 20 34 - -
Gso13g1420 144 Gene3D Tetratricopeptide repeat domain 44 129 IPR011990 GO:0005515
Gso13g1420 144 PANTHER EXPRESSED PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1420 Gso-Chr13 29701033 29702768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1420 - - gmx:100811436 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0198 18 1715411 1716987 Gso13g1420 13 29701033 29702768 GST