Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0169 ATGGACTCGGAATCTTCAAACTCCGATTCTCAACCGCACCCTCTCTCGAACCCAATCGACGACGCGTGCCACGACATGAGCTCCCTGGAAGAGCTCGCGAACCGCGGCGCGTGGCGTTCCATCATTGACAAGGTCTCACGCGCCCGCGCCCTCTCTCTCCTCCACAAGCCCCACGACCACCTCACCTACCTTGCCTTCAACGCCCTCTCCTTCACCAAACTGCGTCGTTTCAACGAAGCCTCTGCGGAACTCGATTCCCTCGAAGACCTCGACAGCTCCCACTACCGCTACGAAACCTACCCCAAAATCTACCCCAATCGGATCGGATCCATGGTCCCCTTCTCCCTCCGGTGGCTCCACGCCCTAATCCCCATCAAATTAGGGCAACGTCAGCAAGGCATGGACCGATTCTACATTCTTCTCGATTTCGTGCGCGGGAAGATTAAGGAAAAGGAGAAACTGAGCAACCTCGGCGTCTCCCTTAATCTGTGGAGAAAAAGAGAGGTTTTTGTGGTGAATTGCATCATAGGGAACCATTTAAGTCAGAAAGAGTTTGGGGTGTGCTTGAGCTTGATGAAGGAGCTTCTCTCTCGCGATTGTTCTGACCCTTTGCTGGTTTCCCAGCTTGGGTACATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAGTTTCGTTCTTGAAGGTGGAGGAGTTGGGGAAGAGTAATGGGTCGTTGAGCGAGGTTGAGTTTAGGAACCTTGTGAATAGGAACAAGGCGTTGGTGTATTTGGTTGGGAAGGATTATGTGTCGGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACAGTGCGGATGTTGTGGCGGTGAACAACAAGGCTCTGTGTTTGATGTATCTGAGGGACTTGTCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAATGAGACTCTTGTTGTCAATTTGTGTAGTATGTATGAGTTGGCGTATGTTAATCACTCTGATATTAAGAGAACGCTTAGTAATTGGATTGCTCGTGTTGCACCTGATGATTTTGATGCATCTTGTACTCGTACATGA 1083 0.5106 MDSESSNSDSQPHPLSNPIDDACHDMSSLEELANRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALSFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRIGSMVPFSLRWLHALIPIKLGQRQQGMDRFYILLDFVRGKIKEKEKLSNLGVSLNLWRKREVFVVNCIIGNHLSQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKVSFLKVEELGKSNGSLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIARVAPDDFDASCTRT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0169 360 Gene3D Tetratricopeptide repeat domain 171 342 IPR011990 GO:0005515
Gso18g0169 360 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 7 359 - -
Gso18g0169 360 SMART tpr_5 246 279 IPR019734 GO:0005515
Gso18g0169 360 SMART tpr_5 280 313 IPR019734 GO:0005515
Gso18g0169 360 SMART tpr_5 203 236 IPR019734 GO:0005515
Gso18g0169 360 MobiDBLite consensus disorder prediction 1 15 - -
Gso18g0169 360 MobiDBLite consensus disorder prediction 1 21 - -
Gso18g0169 360 SUPERFAMILY TPR-like 193 315 IPR011990 GO:0005515
Gso18g0169 360 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 7 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0169 Gso-Chr18 1468341 1471356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0169 K20309 - gmx:100779691 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0169 18 1468341 1471356 Gso13g1453 13 30025518 30028618 GST