Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1453 ATGGAATCGGAATCTTCAATCTCCGATTCTGAAACACACCCTCTCTCGGACCAAATCGACGACGCGTGCCACGACATGAGCTCCCTGGAAGAGCTCGCGAGTCGCGGCGCTTGGCGTTCCATCATCGACAAGGTCTCACGCGCCCGCGCTCTCTCTCTCCTCCACAAGCCCCACGACCACCTCACCTACCTCGCTTTCAACGCCCTCGCCTTCACAAAACTACGTCGTTTCAACGAAGCCTCCGCGGAACTCGATTCCCTCGAAGACCTCCACAGTTCCCACTACCGCTACGAAACCTACCCCAAAATCTACCCCAATCGGATTGGATCCATGGTCCCTTTCTCCCTCCGCTGGGTACACGCCCTAATTCCCATCAAATTAGGGCAACGTCAGCAAGGCATGGATCGCTTCTACATTCTTCTCGATTTCGTGCGTGGAAAGATTAATGAAAAGGAGAAACAGAACAACCTCGGTGTCTCCCTTAATCTGTGGCGTAAAAGAGAGGTTTTTGTCGTGAATTGCATCATAGGGAACCATTTGAGTCAGAAAGAGTTTGGTGTGTGCTTAAGCTTGATGAAGGAGCTTCTCTCTCGCGATTGTTCTGACCCTTTGCTGGTTTCGCAGCTTGGGTATATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAATTTCGTTCTTGAAGGTGGAGGAATTGGGGAAGAGTAATAATGGTTCATTGAGTGAGGTTGAGTTCAGGAACCTTGTGAATAGGAACAAGGCGTTGGTGTATTTGGTTGGGAAGGATTATGTGTCTGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACAGTGCGGATGTTGTGGCAGTGAACAACAAGGCTCTGTGTTTGATGTATCTGAGGGACTTGTCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAATGAGACGCTTGTTGTCAATTTGTGTAGTATGTATGAGTTGGCGTATGTTAATCACTCTGATGTTAAGAGAACGCTTAGTAGCTGGATTGCTCGTGTTGCACCTGATGATTTTGATGCATCTTGTACTCGTACATGA 1086 0.4936 MESESSISDSETHPLSDQIDDACHDMSSLEELASRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLHSSHYRYETYPKIYPNRIGSMVPFSLRWVHALIPIKLGQRQQGMDRFYILLDFVRGKINEKEKQNNLGVSLNLWRKREVFVVNCIIGNHLSQKEFGVCLSLMKELLSRDCSDPLLVSQLGYMQLQIGDLEGAKISFLKVEELGKSNNGSLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIERDSADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDVKRTLSSWIARVAPDDFDASCTRT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1453 361 Gene3D Tetratricopeptide repeat domain 171 341 IPR011990 GO:0005515
Gso13g1453 361 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 13 360 - -
Gso13g1453 361 SMART tpr_5 203 236 IPR019734 GO:0005515
Gso13g1453 361 SMART tpr_5 247 280 IPR019734 GO:0005515
Gso13g1453 361 SMART tpr_5 281 314 IPR019734 GO:0005515
Gso13g1453 361 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 13 360 - -
Gso13g1453 361 SUPERFAMILY TPR-like 193 316 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1453 Gso-Chr13 30025518 30028618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1453 K20309 - gmx:100779190 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0169 18 1468341 1471356 Gso13g1453 13 30025518 30028618 GST