Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0152 ATGGGAAAAAGACAATCTTTGCGCAACAAAGCCACCCACCTTGTTTCTGTCCTTCTCAACCCCATCTCCGATTCCGACACTTCCAATCCCAAAACCTCCAAACAACACCCACCAACACCAACACCTACACCTCCTTCCGGACAAGTAGGTGGATCAGAGACAAATGATGAAGAGGGTAACCGTGGTTTAGTTGATGGGCCTGATACTTCATCCTTCACTGCGTTCCTCTATTCCTTATTGTCTTCCTCTGACACTGGAGATAATGCAAACTCACGCGTGCAGAGTGATGATAATAAATCTGCTGCACCTGATCACAACCCTTTACCAGACTCATCATCGCTGAAGGAAAATGGTGGGAGGAAGAGTTTGATTTCTAGAAGCAAGCAATCAATTGGTAAGGCTATTCGCAGAATTGGTGGATTTCACCATCAGGATCGCAGGGATAATGTTGAAATGAAATTGGATGATGGGCATGGTTCTAAGGTTTCTGGTGGTGTTGAGATGAGGAGAATTGAACCTGTGACTGTGCCTTTGGTTGATCTTCCAGAAATTTCTGAACCTTCAGTTCTCCTTTCAGATAGTATACGGAACGTTCTCTATGTTTCTCTTCCACCTCTTATTCACGGAAGGAAATGGCTGTTGTTGTACAGCACTTGGAGGCATGGTATATCACTTTCCACTCTTTACCGGAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGTGATAAAAAAGGAGCAGTATTTGGCAGCTTAGTTGAAGCACCTCTCAGATCATCCAGCAAGAAAAAATACCAGGGAACAAACAAGACATTTGTTTTCACAAATATCTCTGGTCAGCCTGTTATATATCGTCCAACAGGAGTAAACCGCTTTTTCACACTGTGCAACACTGACTACATAGCAATTGGTGGAGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCGGAAACGTATGGGAATCCTTGCCTTGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTACATGCTTCAAAATATGAAGAAGTACTTGCAATGAGCAAAACAGAAGCACCCGGGATCTGCCGATTCTGA 1125 0.4364 MGKRQSLRNKATHLVSVLLNPISDSDTSNPKTSKQHPPTPTPTPPSGQVGGSETNDEEGNRGLVDGPDTSSFTAFLYSLLSSSDTGDNANSRVQSDDNKSAAPDHNPLPDSSSLKENGGRKSLISRSKQSIGKAIRRIGGFHHQDRRDNVEMKLDDGHGSKVSGGVEMRRIEPVTVPLVDLPEISEPSVLLSDSIRNVLYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVEAPLRSSSKKKYQGTNKTFVFTNISGQPVIYRPTGVNRFFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVHASKYEEVLAMSKTEAPGICRF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0152 374 MobiDBLite consensus disorder prediction 9 34 - -
Gso18g0152 374 MobiDBLite consensus disorder prediction 83 129 - -
Gso18g0152 374 MobiDBLite consensus disorder prediction 1 69 - -
Gso18g0152 374 Pfam TLD 214 351 IPR006571 -
Gso18g0152 374 SMART 109ultra 188 352 IPR006571 -
Gso18g0152 374 MobiDBLite consensus disorder prediction 83 130 - -
Gso18g0152 374 ProSiteProfiles TLDc domain profile. 189 352 IPR006571 -
Gso18g0152 374 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 368 - -
Gso18g0152 374 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0152 Gso-Chr18 1278408 1282383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0152 211 359 EF-hand Containing Proteins AT5G06260 30.818 5.86e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0152 - - gmx:100804124 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0152 18 1278408 1282383 Gso13g1472 13 30214235 30217917 GST