Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1472 ATGGGAAAAAGGCAATCTTTGCGCAACAAAGCCACCCATCTCGTATCTGTCCTTCTCAACCCCATCTCCGATTCCGACACTCTCAATCCCAAAACCTCCAAACACCCCCAACCGACACCAACACCTGCACCTCCTTCTGGAGAAGTAGGTGTAGGTGGATCAGAGACAAATGATGAAGAGGGTAACCGTGGTTTAGTTGATGGGCCTGATACTTCATCCTTCACTGCGTTCCTCTATTCCTTATTGTCTTCCTCTGACACTGGAGATAATGCAAACTCCTCACGGGTGCTGAGTGATGATAATAAAGCTGCAGCACCTGATCACAACCCTTTACCAGACTCATCAACATTGAAGGAAAATGGTGGGAGGAAGAGTTTGATTTCTAGAAGCAAGCAATCGCTTGGTAAGGCCATTCGCAAAATCGGTGGATTTCGCCATCAGGATCGCTGGGATAATCTTGAAATGAAATTGGATGATGGGAATGGTTCTAAGGTTTCTGGTGCTGTTGAGATGAGGAGAATTGAGCCTGTGACTGTGCCTTTGGTTGATCTTCCAGAAATTTCTGAACCTTCAGTTCTCCTTTCAGATAGTATAAGGAATGTTGTCTATGTTTCTCTCCCGCCACTTATTCATGGAAGGAAATGGCTGTTGTTATACAGCACTTGGAGGCATGGTATATCACTTTCTACTCTTTACCGGAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTCGGAGATAAAAAAGGAGCAGTATTTGGCTGTTTAGTTGAAGCACCTCTCAGATCATCCAGCAAGAAAAAATACCAGGGAACAAACAATACGTTTGTTTTCACAAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGAGTAAACCGCTTTTTCACACTTTGCAACACTGACTACATAGCAATTGGTGGAGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCGGAAACGTATGGGAATCCATGCCTTGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTATATGCTTCAAAATATGAGGAAGTACTTGCAATGAGCAAAACAGAAGCACCTGGGATCTGCCGATTCTGA 1134 0.4374 MGKRQSLRNKATHLVSVLLNPISDSDTLNPKTSKHPQPTPTPAPPSGEVGVGGSETNDEEGNRGLVDGPDTSSFTAFLYSLLSSSDTGDNANSSRVLSDDNKAAAPDHNPLPDSSTLKENGGRKSLISRSKQSLGKAIRKIGGFRHQDRWDNLEMKLDDGNGSKVSGAVEMRRIEPVTVPLVDLPEISEPSVLLSDSIRNVVYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGCLVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGVNRFFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYEEVLAMSKTEAPGICRF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1472 377 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 371 - -
Gso13g1472 377 MobiDBLite consensus disorder prediction 18 34 - -
Gso13g1472 377 MobiDBLite consensus disorder prediction 113 131 - -
Gso13g1472 377 MobiDBLite consensus disorder prediction 85 99 - -
Gso13g1472 377 MobiDBLite consensus disorder prediction 85 131 - -
Gso13g1472 377 Pfam TLD 217 354 IPR006571 -
Gso13g1472 377 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 371 - -
Gso13g1472 377 SMART 109ultra 191 355 IPR006571 -
Gso13g1472 377 MobiDBLite consensus disorder prediction 18 69 - -
Gso13g1472 377 ProSiteProfiles TLDc domain profile. 192 355 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1472 Gso-Chr13 30214235 30217917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1472 214 363 EF-hand Containing Proteins AT5G06260 30.000 1.24e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1472 - - gmx:100789336 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0152 18 1278408 1282383 Gso13g1472 13 30214235 30217917 GST