Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0136 ATGACGTCTTCAATGGTGGAAGGTGGACGCGACGAGGGGAAACACGAGCCGTCGGATTTGATCACGGAAACCATGAATCTGACGGCTCCAAACCTTTCACTTCCCAGTGAAACTGAAACATTCTTGAGCGCAGCAATTTCCCTCAAGGACAAGGTGGTGGAGGAGACTTGGAACCGGAGAGATCAAGTGGTTGATCCGACGGTGTACACGGGACTGTTGGGCACCGCCTTTACTTGCTTGCGGTCCTACCAGGTTACCGGTTGCCGGAACGACTTAATATTATCCAGCGAAATCATTGACACGTGTGTCACCGCTGCACGTGCCTCCCTCAGGCACGTGACTTTTTTGTGTGGTAGAGGAGGCGTTTATGCGCTTGGTGCTGTCGTTGCCAATTACATGGGGGACCTTCAAAAGCGTGACCTGTTTTTGGGTCTATTCATTGAGGTGGCAAAAGAGAGAGCCCTACCAGTTGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATCTTCTGTATGGACGAGCTGGATTCTTATGGGGTGCATTGTTCGTGAACAAGCACCTAGGAGAAGATGCAGTGCCCAAAGACATTTTGATGCTTATTATTGATGCGGTGTTGGCTGGTGGTAGAGCAGGAGCATCTGATATTAAAGACTGCCCATTGATGTATAGATGGCATGGAACAAGGTACTTGGGTGCAGCAAATGGCCTTGCTGGTATCCTTCATGTGCTGCTACATTTTCCACTTCCAAGTGAGGATGCTGAGGATGTCAAGGGAACTTTGTGGTACCTCATGAGTAAGCGTTTCCCTCACAGTGGAAACTATCCCTCCAGTGAAGGGAATCCAAGGGATAAGTTAGTGCAATGGGGTCATGGGGCGACTGGCATGGCCATCACGTTGTCCAAAGCAGCAGAGGTATTTCCTAATGACAGAGAACTAAGAGATGCTGCAATAGAAGCAGGTGAAGTTGTATGGAAGAGTGGATTGGTGAAGAAGGTGGGACTTGCAGATGGGGTATCTGGGAATGCCTATGCCTTCCTTTCCCTCTACAGACTCACTAAAGAGAGTATATACGAAGAGAGAGCAAAATCATTCGCTTCCTTCTTGTATGATAATGCAAAATCTCTGGCTGCTGCCAATGGCTATTCACTTTTCCAAGGACTTGCTGGGACAGCATGCCTCTGGTTTGATCTGCTTGCACCCGACAACTCTAGGTTCCCAGGTTATGAATTATAG 1236 0.4854 MTSSMVEGGRDEGKHEPSDLITETMNLTAPNLSLPSETETFLSAAISLKDKVVEETWNRRDQVVDPTVYTGLLGTAFTCLRSYQVTGCRNDLILSSEIIDTCVTAARASLRHVTFLCGRGGVYALGAVVANYMGDLQKRDLFLGLFIEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWGALFVNKHLGEDAVPKDILMLIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPSEDAEDVKGTLWYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAEVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERAKSFASFLYDNAKSLAAANGYSLFQGLAGTACLWFDLLAPDNSRFPGYEL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0136 411 PRINTS Eukaryotic LanC-like protein family signature 198 213 IPR020464 -
Gso18g0136 411 PRINTS Eukaryotic LanC-like protein family signature 266 281 IPR020464 -
Gso18g0136 411 PRINTS Eukaryotic LanC-like protein family signature 304 325 IPR020464 -
Gso18g0136 411 PRINTS Eukaryotic LanC-like protein family signature 349 367 IPR020464 -
Gso18g0136 411 PRINTS Eukaryotic LanC-like protein family signature 397 411 IPR020464 -
Gso18g0136 411 Gene3D - 19 411 IPR012341 GO:0005975
Gso18g0136 411 SMART LANC_like_2 62 411 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 65 83 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 168 183 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 230 246 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 286 306 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 333 346 IPR007822 -
Gso18g0136 411 PRINTS LanC-like protein superfamily signature 381 398 IPR007822 -
Gso18g0136 411 Pfam Lanthionine synthetase C-like protein 63 411 IPR007822 -
Gso18g0136 411 PANTHER LANC-LIKE PROTEIN 17 411 - -
Gso18g0136 411 SUPERFAMILY LanC-like 55 411 - -
Gso18g0136 411 PANTHER LANC-LIKE PROTEIN GCL1 17 411 - -
Gso18g0136 411 CDD euk_LANCL 68 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0136 Gso-Chr18 1153006 1157738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0136 - - gmx:100785406 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0136 18 1153006 1157738 Gso13g1483 13 30328789 30333806 GST