LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g1483	ATGACGTCTTCAGTGGTTGAAGGTGGACGCGACGAGGGGAAACACGAACCCTCGGATTTCATCACGGAAACCATGAATCTGCCGTCTCCAAACCTTTCACTTCCCAGTGAAACTGAAACATTCTTGAGCGCAGCAATTTCCCTCAAGGACAAGGTGGTGGAGGAGACTTGGAACCGGAGAGATCAAGTGGTTGATCCGACGGTGTACACGGGTCTGTTGGGCACCGCCTTCACTTGCTTGCGGTCGTACCAGGTTACCGGTTGCCGGAACGACTTGATATTATGCAGCGATATCATTGACACGTGTGTCACCGCTGCACGTGCCTCCCTCAGGCACGTGACTTTTTTGTGTGGTAGAGGAGGCGTTTATGCGCTTGGTGCTGTCGTTGCCAATTACATGGAGGACCTTCCAAAGCGTGACCTGTTTTTGGGTCTATTCTTTGAGGTGGCAAAAGAGAGAGCCCTACCAGTTGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATCTTCTGTATGGACGAGCTGGATTCTTATGGGGTGCATTGTTTGTGAACAAGCACCTAGGAGATGATGCAGTGCCCAAAGACATTTTGATGCCTATTATTGATGCAGTGTTGGCGGGTGGTAGAGCAGGAGCATCTGATGTTGAAGACTGTCCATTGATGTATAGATGGCATGGAACTAGGTACTTGGGTGCAGCAAATGGCCTTGCTGGTATCCTTCATGTGCTGCTACATTTTCCACTTCCTAGAGAGGATGCTGAGGATGTCAAGGGAACTTTGAGGTACCTCATGAGTAAGCGTTTCCCTCACAGTGGAAACTACCCCTCCAGTGAAGGGAATCCGAGGGATAAGTTAGTGCAATGGGGTCATGGTGCAACTGGCATGGCCATCACATTGTCTAAAGCAGCACAGGTATTTCCAAATGACAGAGAACTACGAGATGCTGCAATAGAAGCAGGAGAAGTTGTATGGAAGAGTGGATTGGTGAAGAAGGTGGGACTTGCAGATGGGGTATCTGGAAATGCCTATGCCTTCCTTTCCCTCTACAGACTCACTAAAGAGAGCATATACGAAGAGAGAGCAAAGTCATTCGCTTCCTTCATGTATGATAATGCAAAATCTCTGGCTTCTGCCAATGGCTATTCACTTTCCCAAGGACTTGCTGGGACAGTATGCCTCTGGTTTGATCTACTTGCACCCGACAGCTCTAGGTTCCCAGGTTATGAACTATAG	1236	0.4871	MTSSVVEGGRDEGKHEPSDFITETMNLPSPNLSLPSETETFLSAAISLKDKVVEETWNRRDQVVDPTVYTGLLGTAFTCLRSYQVTGCRNDLILCSDIIDTCVTAARASLRHVTFLCGRGGVYALGAVVANYMEDLPKRDLFLGLFFEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWGALFVNKHLGDDAVPKDILMPIIDAVLAGGRAGASDVEDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPREDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAQVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLYRLTKESIYEERAKSFASFMYDNAKSLASANGYSLSQGLAGTVCLWFDLLAPDSSRFPGYEL*	412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g1483	411	Pfam	Lanthionine synthetase C-like protein	63	411	IPR007822	-
	Gso13g1483	411	PANTHER	LANC-LIKE PROTEIN GCL1	17	411	-	-
	Gso13g1483	411	PRINTS	Eukaryotic LanC-like protein family signature	198	213	IPR020464	-
	Gso13g1483	411	PRINTS	Eukaryotic LanC-like protein family signature	266	281	IPR020464	-
	Gso13g1483	411	PRINTS	Eukaryotic LanC-like protein family signature	304	325	IPR020464	-
	Gso13g1483	411	PRINTS	Eukaryotic LanC-like protein family signature	349	367	IPR020464	-
	Gso13g1483	411	PRINTS	Eukaryotic LanC-like protein family signature	397	411	IPR020464	-
	Gso13g1483	411	Gene3D	-	22	411	IPR012341	GO:0005975
	Gso13g1483	411	SUPERFAMILY	LanC-like	55	411	-	-
	Gso13g1483	411	PANTHER	LANC-LIKE PROTEIN	17	411	-	-
	Gso13g1483	411	CDD	euk_LANCL	68	407	-	-
	Gso13g1483	411	SMART	LANC_like_2	62	411	IPR007822	-
	Gso13g1483	411	MobiDBLite	consensus disorder prediction	1	29	-	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	65	83	IPR007822	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	168	183	IPR007822	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	230	246	IPR007822	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	286	306	IPR007822	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	333	346	IPR007822	-
	Gso13g1483	411	PRINTS	LanC-like protein superfamily signature	381	398	IPR007822	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g1483	Gso-Chr13	30328789	30333806	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g1483	-		-	gmx:100782771	825.854

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g0136	18	1153006	1157738	Gso13g1483	13	30328789	30333806	GST