Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0110 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCTATCGATCGGGACCGGGCGAACCCTGTGGTGGCCAAATCGCCGAGTCAGTGTCAGCTAGGGCTCGATGCGTCCATCAGGACCGTCAACTACGCCTCCAAATCGAGCTTCTCCACTCAGGATTCCTCCGTCGGCGCCGATTCCGTCAAGGCCACCGCCGCCGCGGATCTCGAAGAGGAGGAGGAGCCGCGCGATTCCAGGGCCTTCGCCGGAGGGAACGGTGGCGGAGTGGCCGGGAGTGTGGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGGTCGAGGTGGTTCGTGCTAGAAGATGGCGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTAATGAGTCCGGCGAGGGATAGGAGCGTCAGGGTGATCGGAGAAGAGTCATCGAAGTTCGTGAAGAAGGCGAATTGGAATCTGAATCTGAATCGAGCATCGTCTGGAGGAGGAGTAGGAGGAGGTAATAACAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCTGTTCGTTCCAGCAAGTCTGATGATAAGCGGCTTTCCATTTTTACTGGGACAAAAACTCTTCACTTGAGGTGTGTGTCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGTAAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGCGATCTTGCAACTTCTGAAGATATCGTAGTTTCGACAGAGAAGCTGCGATTACGATTGTCTCAGGAAGGCATAAGTGAAACAATCATTAATGACTGTGAGTCTATTATGCTTTCCGATGTCTCTTATCTTCAAAGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGCTGGACACCTTAAAACAACTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAACGTGAATCATACTGTGGACAAGGAAATAGAAGGTTTAGTGATTTCTATTCCGTCATGTCAGAGGGCAGTGTTACTGATTCAGTGGCGGATAATGAAAGTCAAGATGGAGCAGATGGTGAAACAGATGATGAGGATAGAACATACTTTGACACAAATGAGTTTTTGTATTCCGATGCCCTAAGAAGTGCTTCCTATCGAAGTAGGGAAGGTATGGGCAATGCCAGTATATCCGATAGAGATTATATTTGTTATGATGGTGTGCATGGGTTTGAGAAGGAGATCAAAGATGTAAGTTATCCATATGTCAAAAGAAGGGATAACCTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGTTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTCTATTTTAACGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCTATGCGTCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTCGGGGAGACCTACGAAGCTGACTATCCAGATAAAGGACTTAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGGGGATGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCTATCCAGTTAGATCCTGTGGGTGTCCTCACTCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCGATTTACAATATCATACTAGGTAAAATTTATTGTGACCACTACGGTACCATGCACATCAAGGGCAGTGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAGTCTATTATAGACAGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGGGAAGGTAGCGATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTCGGGGATCCAACCACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACCATGTACCGAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTATTAGAGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGCTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACTGGCAAGAAAGATGCAAGAAAGAGGATGGCAACCAAGATGGTTTAAGAAGGATGAGGATGGTTGTTTCCGATATATTGGTGGCTATTGGGAAACAAGAGAAAAGAATAATTGGAACGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCGGAAGAGACTGTATCCTACTGA 2472 0.4442 MNPLCCIAPVSIDRDRANPVVAKSPSQCQLGLDASIRTVNYASKSSFSTQDSSVGADSVKATAAADLEEEEEPRDSRAFAGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDRSVRVIGEESSKFVKKANWNLNLNRASSGGGVGGGNNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSVKDLFPRALTSSDLATSEDIVVSTEKLRLRLSQEGISETIINDCESIMLSDVSYLQSKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSVTDSVADNESQDGADGETDDEDRTYFDTNEFLYSDALRSASYRSREGMGNASISDRDYICYDGVHGFEKEIKDVSYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGGKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNHVPKTRYNLSPFAISLNEILPGLLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRLARKMQERGWQPRWFKKDEDGCFRYIGGYWETREKNNWNGIPDIFGQSCDLPSCSEETVSY* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0110 823 Coils Coil 289 323 - -
Gso18g0110 823 SMART PH_update 89 235 IPR001849 -
Gso18g0110 823 SUPERFAMILY PH domain-like 91 233 - -
Gso18g0110 823 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 812 - -
Gso18g0110 823 Gene3D - 739 803 - -
Gso18g0110 823 Gene3D - 528 695 - -
Gso18g0110 823 ProSiteProfiles PH domain profile. 88 233 IPR001849 -
Gso18g0110 823 Gene3D - 88 235 IPR011993 -
Gso18g0110 823 MobiDBLite consensus disorder prediction 347 368 - -
Gso18g0110 823 Coils Coil 750 770 - -
Gso18g0110 823 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 812 IPR000648 GO:0008289
Gso18g0110 823 Pfam Pleckstrin homology domain 93 229 - -
Gso18g0110 823 SUPERFAMILY Oxysterol-binding protein-like 437 809 IPR037239 -
Gso18g0110 823 Pfam Oxysterol-binding protein 443 796 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0110 Gso-Chr18 900237 907579 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0110 K20456 - gmx:100788779 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0110 18 900237 907579 Gso13g1513 13 30589245 30595717 GST