Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1513 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCCATCGATCGGGACCGCCCCAACCACGTGCTGGCAAAATCGCCCGCTCAGTGTCAGTTAGGGCTCGATGCGTCCATCAGGACGGTGAACCACGCCTCCAAATCCAGCTCCTCCACGCAGGATTCCTCCGTCGCCGTCGACTCCGTCAAGGCCACCTCCGCCGTCGCGGATCTCCCGGAGGAGGAGGAGCCACGCGATTCCAAGGCCTTCTCCGGCGGGAACGGCGGCGGAGTGGCTGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGATCGAGGTGGTTCGTGTTGGAAGATGGAGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCGAAGGATAGGAGCGTCAGGGTGATCGGAGAAGAGTCATCGAAGTTTGTGAAGAAAGCGAATTGGAATCTGAATCTGAATCGAGCATCTTCTGGTGGAGGAGTAGGAGGAGGTAATAGCAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGATGATAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTTCACTTGAGGTGCGTGTCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGCGATCTTGCAACTTCAGAAGATATCGTAGTTTCAACAGAGAAGCTGCGATCACGATTGTCACAGGAAAGCATAAGTGAAACAATCATTAATGACTGTGAGTCTATTATGCTTTCCGAAGTCTCTTATCTTCAAAGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGCTGGACACCTTAAAACAACTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAACGTGAATCATACTGTGGACAAGGAAATAGAAGGTTTAGTGATTTCTATTCCGTCATGTCGGAGGGCAGTGCTACTGATTCAGTGGCGGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGAGGATAGAACATATTTTGACACAAATGAATTTTTGTATTCTGATGCCCTAAGAAGTGCTTCCTATCGAAGTAGGGAAGGTATGGGCAATGCTAGTATATTCGATAGAGATTATATTTGTTATGATGGTGTGCATGGGTTTGACAAGGAGATCAAAGATGTAAGTTATCCATATGTCAAAAGAAGGGATAACCTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGTTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAACGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCACTGGAGTGGGGAAAGCAGGGGAATGACTTGATGAGAATTCTAAACATTGCAGCTTTTGCTGTGTCTAGCTATGCGTCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACCTACGAAGCTGACTATCCAGATAAAGGACTTAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGGGGTTGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCTATCCAGTTAGATCCTGTGGGTGTCCTCACTCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATACTAGGTAAAATTTATTGTGACCACTACGGTACCATGCACATCAAGGGCAGTGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCCATTATTGACAGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCGATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGGGATCCAACCACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACCATTTACCGAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTATCAGAGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGCTGGCAAATGCAGAAAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAACCGAGATGGTTTAAGAAGGAAGAGGATGGTTGTTACCGATATATTGGTGGCTATTGGGAAACAAGAGAAAAGAATAATTGGGACGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGCTCGGAAGAGACTGCATCCTACTGA 2475 0.4428 MNPLCCIAPVSIDRDRPNHVLAKSPAQCQLGLDASIRTVNHASKSSSSTQDSSVAVDSVKATSAVADLPEEEEPRDSKAFSGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKDRSVRVIGEESSKFVKKANWNLNLNRASSGGGVGGGNSSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATSEDIVVSTEKLRSRLSQESISETIINDCESIMLSEVSYLQSKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDEDRTYFDTNEFLYSDALRSASYRSREGMGNASIFDRDYICYDGVHGFDKEIKDVSYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNHLPKTRYNLSPFAISLNEILPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKEEDGCYRYIGGYWETREKNNWDGIPDIFGQSCDLPSCSEETASY* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1513 824 Gene3D - 89 236 IPR011993 -
Gso13g1513 824 Gene3D - 740 804 - -
Gso13g1513 824 SUPERFAMILY Oxysterol-binding protein-like 438 810 IPR037239 -
Gso13g1513 824 Gene3D - 529 696 - -
Gso13g1513 824 SMART PH_update 90 236 IPR001849 -
Gso13g1513 824 SUPERFAMILY PH domain-like 92 234 - -
Gso13g1513 824 MobiDBLite consensus disorder prediction 347 366 - -
Gso13g1513 824 MobiDBLite consensus disorder prediction 64 83 - -
Gso13g1513 824 Coils Coil 751 771 - -
Gso13g1513 824 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 813 - -
Gso13g1513 824 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 813 IPR000648 GO:0008289
Gso13g1513 824 Coils Coil 290 324 - -
Gso13g1513 824 ProSiteProfiles PH domain profile. 89 234 IPR001849 -
Gso13g1513 824 Pfam Pleckstrin homology domain 94 231 - -
Gso13g1513 824 Pfam Oxysterol-binding protein 444 797 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1513 Gso-Chr13 30589245 30595717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1513 K20456 - gmx:100817856 1648.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0110 18 900237 907579 Gso13g1513 13 30589245 30595717 GST