Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0104 ATGGCAGCAACCCTAGCAGCAACAAAGGCTATGATAAACTCCAAGTGTTTGAACCCAATAACAGGGTCATCACCCAAGTCGAACAATCCCAAGCTCCCACCTTCAAAACCCACACTCTCCCTCTTCTCCATTCAGAACTTCCCAAAGGGAATAACCTCCAACGTCTCAACTTCCACAGCAGGCACTGCCATTGCAGGCGCAATATTCTCCTCACTCGCAAACTGTGACGCAGCCTTGGCTGCGTCGCAAATTGCTGAAATAGCGGAAGGCGATAACCGTGGGCTGGCACTGCTGTTGCCATTGATTCCCGCCATAGCGTGGGTGCTGTTCAACATTCTGCAGCCAGCGCTGAACCAACTGAACCGCATGCGTAGCAGCAAGGGGGTCATCATTGGGCTTGGGCTTGGGCTCGGGCTGGGCGCATCAGGCATGCTTTTCGGCCTAGATGCATCGGCTAGTGAGATTTCTGTGATTGCTGATGCTGCCACCAGTGACAACAGGGGACAGCTTCTGCTGATTGTGGTTACACCAGCGATTGTTTGGGTTCTGTACAACATTTTGCAACCGGCACTCAACCAGCTTAACAGAATGAGATCAGAGTAG 603 0.5224 MAATLAATKAMINSKCLNPITGSSPKSNNPKLPPSKPTLSLFSIQNFPKGITSNVSTSTAGTAIAGAIFSSLANCDAALAASQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQLNRMRSSKGVIIGLGLGLGLGASGMLFGLDASASEISVIADAATSDNRGQLLLIVVTPAIVWVLYNILQPALNQLNRMRSE* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0104 200 Hamap Photosystem II protein Y [psbY]. 91 125 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso18g0104 200 Pfam Photosystem II protein Y (PsbY) 91 123 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso18g0104 200 Pfam Photosystem II protein Y (PsbY) 165 197 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso18g0104 200 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 199 - -
Gso18g0104 200 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 199 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0104 Gso-Chr18 847701 848559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0104 K02723 - gmx:100814665 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0104 18 847701 848559 Gso13g1519 13 30650347 30651234 GST
Gso8g1091 8 10075681 10076598 Gso18g0104 18 847701 848559 PCT