Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1519 ATGGCAGCAACCATAGCAACAACAATGGCTATGATCAACTCAAAGTGCATCAACACAACAGGGTCATCACACAAGTTGCACAACCCCAAGCTCCCACCCTCAAAACCCACCCTCTCCCTTTTCTCCCTTCAGAACCTCCCAAAGGGCCTAACCTCCCACGTCTCAACTTCCACAGCAGGCACTGCCATCGCAGGCGCAATATTCTCCTCACTCGCAAACTGCGACGCAGCCTTAGCTGCATCGCAAATTGCTGAATTAGCCGAAGGTGATAACCGCGGGCTGGCATTGTTGTTGCCGTTGATTCCAGCCATAGCGTGGGTGCTGTTCAACATTCTGCAGCCAGCACTGAACCAACTGAACCGCATGCGTAACAGCAAGGGGGTCATCGTTGGGCTCGGGCTAGGGCTCTGTGCATCGGGCATGATGTCCGGCCCAGAAGCGTCGGCTAGTGAGATTGCTATGATTGCCGATGCTGCTGCCAGTGACAACAGGGGACAGCTTCTGCTGTTTGTGGTTACACCAGCGATTGTTTGGGTTCTGTACAACATTTTGCAACCGGCACTCAACCAGCTTAACAGAATGAGATCCGAGTAG 594 0.532 MAATIATTMAMINSKCINTTGSSHKLHNPKLPPSKPTLSLFSLQNLPKGLTSHVSTSTAGTAIAGAIFSSLANCDAALAASQIAELAEGDNRGLALLLPLIPAIAWVLFNILQPALNQLNRMRNSKGVIVGLGLGLCASGMMSGPEASASEIAMIADAAASDNRGQLLLFVVTPAIVWVLYNILQPALNQLNRMRSE* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1519 197 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 196 - -
Gso13g1519 197 Hamap Photosystem II protein Y [psbY]. 90 124 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso13g1519 197 Pfam Photosystem II protein Y (PsbY) 162 194 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso13g1519 197 Pfam Photosystem II protein Y (PsbY) 90 122 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Gso13g1519 197 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 196 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1519 Gso-Chr13 30650347 30651234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1519 K02723 - gmx:100814665 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0104 18 847701 848559 Gso13g1519 13 30650347 30651234 GST
Gso8g1091 8 10075681 10076598 Gso13g1519 13 30650347 30651234 PCT