Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0079 ATGTTGGGAGTTATACGAGCTCGAACGTGGTTGCGATATTCAGAGCCCCTTCTTCAACCATGGAAGGTAGGGTTCTCCTCTTTGTCCGCCATTGACGGCCGTAAACACCACCTTCTGAATCTGCAGGAGATCGAGACGGTTCTGACCGACGTTAAAGCTGACGACGTTAAGGTGATACCAGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTACTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCTCAAGCCCTAATTTACAAGGCTAAGCAGAAACAGAGAGGAGTTGAACGAATGATGCTACCGAGTGTGGAAGGTCAAGCAGGAGGAAAGTGGATCGTCATTGACTCTGGTAAAGTGATAGTTCATGCACTCGATGAAAAGGCTAGAGCTTACTACAATTTAGAGGGTCTTTGGACCCCTGGGGGAATTCAAAATGAACATGATGAGGATTTACAAAAGGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCAAAGAAACCTGCACAAAAGAATGCTTAA 534 0.4719 MLGVIRARTWLRYSEPLLQPWKVGFSSLSAIDGRKHHLLNLQEIETVLTDVKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQRGVERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGGIQNEHDEDLQKALVKVRRKNNSKKPAQKNA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0079 177 PANTHER IOJAP SUPERFAMILY ORTHOLOG 30 168 IPR004394 -
Gso18g0079 177 SUPERFAMILY Nucleotidyltransferase 42 148 IPR043519 -
Gso18g0079 177 Gene3D Beta Polymerase, domain 2 38 161 IPR043519 -
Gso18g0079 177 Hamap Ribosomal silencing factor RsfS [rsfS]. 30 144 IPR004394 -
Gso18g0079 177 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 30 168 - -
Gso18g0079 177 Pfam Ribosomal silencing factor during starvation 43 143 - -
Gso18g0079 177 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 42 143 IPR004394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0079 Gso-Chr18 671953 675001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0079 - - gmx:100500386 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0079 18 671953 675001 Gso13g1542 13 30817838 30820875 GST