Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1542 ATGTTGGGAGTTATCGGAGCTGGAACGTGGTTGCGATATTCAAAGGCCCTTCTTCAACCATGGAAGGTAGGGTTCTCCTCTTTGTCCGCTGTCGACGGCCGGAAACACCACCTTCTGGATTTGCAGGAGATCGAGACGGTTCTCACCGACGTTAAAGCTGACAACGTTAAGGTTATACCAGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTACTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCCCAAGCCCTAATTTACAAGGCTAAGCAGAAACAGAGAGGAGTTGAACGAATGATGCTACCAAGTGTGGAAGGTCAAGCAGGAGGAAAGTGGATCGTCATTGACTCTGGTAAAGTGATAGTTCATGCACTTGATGAAAAGGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCCAGGGACAATTCAAAATGAACGTGAAGAGGATTTACAAAAAGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCAAAGAAACCTGCACAAAAGAATGCTTAA 534 0.47 MLGVIGAGTWLRYSKALLQPWKVGFSSLSAVDGRKHHLLDLQEIETVLTDVKADNVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQRGVERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGTIQNEREEDLQKALVKVRRKNNSKKPAQKNA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1542 177 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 32 168 - -
Gso13g1542 177 Gene3D Beta Polymerase, domain 2 39 159 IPR043519 -
Gso13g1542 177 SUPERFAMILY Nucleotidyltransferase 42 149 IPR043519 -
Gso13g1542 177 PANTHER IOJAP SUPERFAMILY ORTHOLOG 32 168 IPR004394 -
Gso13g1542 177 Hamap Ribosomal silencing factor RsfS [rsfS]. 33 144 IPR004394 -
Gso13g1542 177 Pfam Ribosomal silencing factor during starvation 43 143 - -
Gso13g1542 177 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 42 143 IPR004394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1542 Gso-Chr13 30817838 30820875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1542 - - gmx:100500659 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0079 18 671953 675001 Gso13g1542 13 30817838 30820875 GST