Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0069 ATGTTTGGCTCCGCTCAACCTTCTTCTTCTCCCTTCGGCACCCCTTCTTCTACCCCTGCTTTTGGCACCCCTTCTTCGACCCCTGCTTTTGGCACCCCTTCTTCGACCCCAGCATTCGGTACCCCTTCCTTCGCTACCCCTTCTTCTACCCCTGCATTCGGTACCCCTTCTTCTACCCCTGCCTTCGGTTCTTCCCTCTTCTCCACACCCTTCTCTTCTCAACCGCAACAACAACAACAACAACAACAACAGCAACAAACTTCACTTTTTCAACAACAACAAACTTCTTCTGCTTTCGGCTTTCAGAATTCCCTCGCACTCGCAGCACCGCAACCCTCGCTCTTCCCAAATGCTCAATTGACCACTCAGATGGCTAACGTTGCACCTGTTCCTTTCTCCCTCGCTGATCGCGATGTTCAGACTATTGTTGATGCTTATAAGGAAGATCCCGGGAACCCCAAGTACGCATTTAAGCATTTGTTGTTCAGTGTAACAGAACCGCAGTTTAGAGTGAAGCCTGCCGGTGTATCAGATATCATGTGGGCGGAGGCAATGGGGAAGCTTGAGGGTATGGAAAGTGCTGATAGAGAACGTCTGTGGCCACAACTTGTTCAGGGTTTTAAGGATCTTTCACAACGCCTTAAGATACAAGATGAAGTCATTGTTTCTGATGCAGAGAGATTGCGTATAACCCAAAGCAACGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCTTGGATTCAAAGACTGAAACAAAAAGAACAAATTCTCCAGCAACGTCTTTTAAGAGTAATGAGAATAGTGGAGGCATTGGAGGAAAAAGGCTGCCGTATCCCCTTAACAAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCCACAATAACTAGACAGCTGAAAGGATCTGGAGCGGAACTGTCAAGAAGGGTACAAAATCTACTAACTGTATCTCGTGTTAAAGCTAATAGCAATGGATTTGGTAGCTCCGTTTATCTTCCAGGGTCAACCAAAATTCATGAACAGAGTCTTGGTGATCTACAAGAGGTTTTACAGCAGCAGATGGAGGCCATTGCAAGACTTGGCAGTGTTCTGAAGCGAGATATACGGGATATGGAGATTATGATGACCGAGGACACAGCAAGAACTGAAAATGGGAATTTAATCTGA 1173 0.4595 MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTPAFGSSLFSTPFSSQPQQQQQQQQQQQTSLFQQQQTSSAFGFQNSLALAAPQPSLFPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEEKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLTVSRVKANSNGFGSSVYLPGSTKIHEQSLGDLQEVLQQQMEAIARLGSVLKRDIRDMEIMMTEDTARTENGNLI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0069 390 Pfam Nucleoporin complex subunit 54 172 316 IPR025712 -
Gso18g0069 390 MobiDBLite consensus disorder prediction 1 94 - -
Gso18g0069 390 PANTHER NUCLEOPORIN P54 1 382 - -
Gso18g0069 390 PANTHER NUCLEOPORIN P54 1 382 IPR024864 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0069 Gso-Chr18 589677 593427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0069 K14308 - gmx:100797030 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0069 18 589677 593427 Gso13g1552 13 30901922 30905629 GST