Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1552 ATGTTTGGCTCCGCTCAACCTTCTTCTTCTCCCTTCGGCACCCCTGCATTCGGTACCCCTTCTTCTACCCCTGCCTTCGGTTCTTCCCTCTTTTCCACACCCTTCTCTTCTCAACAACCACAACCACAACAACAGCAGCAACAACAAACACCTCTGTTTCAACAGCAACAACAACAACAAACTTCTTCTGCTTTCGGCTTTCAGAATTCACTCGCATTCGCAGCACCGCAATCCTCGCCCTTCCCAAATGCTCAATTAACCACTCAGATGGCTAACGTTGCACCTGTTCCTTTCTCCCTCGCCGATCGCGATGTTCAGACTATTGTTGATGCATATAAGGATGATCCTGGGAACCCCAAGTACGCCTTTAAGCATTTGTTGTTCAGTGTAACAGAACCGCAGTTTAGAGTGAAGCCTGCTGGTGTATCAGATATCATGTGGGCAGAGGCAATAGGGAAGCTTCAGGGTATGGAAAGTCCTGATAGAGAACGCCTGTGGCCACAGCTTGTTCAGGGTTTTAAGGATCTTTCACAACGCCTTAAGATACAAGATGAAGTCATCGTTTCTGATGCGGAGAGATTGCGTATAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCTCGGATTCAAAGACTGAAACAAAAAGAACAAATTCTCCAGCAACATCTTTTAAGAGTAATGAGAATAGTGGAGGCATTGGAGGAAAAAGGCTGTCGTATACCCTTAACAAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCCACAATAACTAGAAAGCTGAAAGGATCTGGAGCGGAACTGTCTAGAAGAGTACAAAATCTACTAATTGTATCTCGTGTTAAAGCTAATAGCAATGGATTTGGTAGCTCCGTTTATCTTCCAGGGTCAACCAAAATTCATGAACAGAGTCTTGGTGATCTACAAGAGGTTTTACAGCAGCAGCTGGAGGCCATTGCAAGACTAGGCAATGTTCTGAAGCGAGATATACGGGATATGGAGATTATGATGACCGAGGACACGAAGAACTGA 1050 0.4467 MFGSAQPSSSPFGTPAFGTPSSTPAFGSSLFSTPFSSQQPQPQQQQQQQTPLFQQQQQQQTSSAFGFQNSLAFAAPQSSPFPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKDDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAIGKLQGMESPDRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPRIQRLKQKEQILQQHLLRVMRIVEALEEKGCRIPLTKGEAELAEKLATITRKLKGSGAELSRRVQNLLIVSRVKANSNGFGSSVYLPGSTKIHEQSLGDLQEVLQQQLEAIARLGNVLKRDIRDMEIMMTEDTKN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1552 349 Pfam Nucleoporin complex subunit 54 138 281 IPR025712 -
Gso13g1552 349 PANTHER NUCLEOPORIN P54 2 348 IPR024864 GO:0005643
Gso13g1552 349 MobiDBLite consensus disorder prediction 1 60 - -
Gso13g1552 349 PANTHER NUCLEOPORIN P54 2 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1552 Gso-Chr13 30901922 30905629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1552 K14308 - gmx:100791608 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0069 18 589677 593427 Gso13g1552 13 30901922 30905629 GST