Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0059 ATGCAAACTAAGAAAAAAACCTCTAGGCGAAATGCCAGTCAAGAGTGTGGCAGTCCTAAAGTTTTAAGAGCACCGAGGAAGGTCTCTGAAAATGGTCGAGCTACTGAAAAGAAAGTCAAAGATTTAATAACATCATCTGCTAGAAAGAATAAATCTTTTAGCACTCTTGAGAATAAAGCTAGAGAGCCTATCCCTCCTACAGATTTGAATAATGGATATGAGTTTATGGACAGTGGGAATTCCAATGCTTGTTTGGAAAATGATGCAGTTGACGGCATTTCATTAGATTCTATGGGTTGTAACAATCAAGCTGTTCATCTGGAATCTGGAACTATATTTTCTCCCGGGTTTCACTTGTCCAAAAATTCTGGAGGAGTTGACAAAGTTGATTTTATCAAAATTTTTCAGAATGAAGACCATGAGAGAGTTTCTCCGTGCCAAGAAATAGAGTCACCACAGGAAGATGCAGTAGATGGTCATCTTAGTCAAGACTCTGACACTGCAATGGAGGTAGACATAAACAATTCATCCAACTACTCAAATTCAGGGAGATGTGGCAATCAGATGCTTGCTTTAAGCACAACAAATGTGAATGGTTGCAATTCTGATTATGATGGAAATGGTCTTTCCATGGAAGTTTCTGCCATATATCTTGCCGTGAAAAACTCAAAGCTGGAATGTGTTGACGAGCACAGTCAGAATCCCATGTCTTCTGAAATATGCACAGAGGAGGATGAATTTGAGGATTTTGATGACTTTGACCCATACTTATTTATAAAGACCTTGCCAGACTTGTCAACGGTGGTTCCAACATTTAGACGATTGTTGTTACCCAAGCAGACACGTAGTTGCCCTTCTACTACTCTTGTCCTGGACTTAGATGAAACTTTGGTGCATTCTACCCTGGAACATTGTGAGGATGTAGACTTCACTTTTCCTGTTAATTTCAATAGTGAGGAGCACATTGTCTATGTACGCTGCCGCCCTCACCTCAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACTGCTAGTCAAAGCATTTATGCCGAGCAACTTCTAAATGTGCTTGATCCAAAGCGGAAGATATTTCGCCACCGTGTATACCGTGAGTCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTTGGTCGTGATTTGGCACATGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAAGTGGATAATGGAATACCAATCGAGAGTTGGTTTGATGATCGTTCAGATCAAGAATTGTTTTTGTTACTTCCGTTCTTGGAGAGCTTGGTTGGTGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTGCGGGAGAAAATTGCTGCAGCTGCGCTTCCTCTAAATACAAATAGAAGAGATTTCTTATCCGAATGA 1437 0.4001 MQTKKKTSRRNASQECGSPKVLRAPRKVSENGRATEKKVKDLITSSARKNKSFSTLENKAREPIPPTDLNNGYEFMDSGNSNACLENDAVDGISLDSMGCNNQAVHLESGTIFSPGFHLSKNSGGVDKVDFIKIFQNEDHERVSPCQEIESPQEDAVDGHLSQDSDTAMEVDINNSSNYSNSGRCGNQMLALSTTNVNGCNSDYDGNGLSMEVSAIYLAVKNSKLECVDEHSQNPMSSEICTEEDEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEHCEDVDFTFPVNFNSEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELFLLLPFLESLVGVDDVRPLIAKKFNLREKIAAAALPLNTNRRDFLSE* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0059 478 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 287 450 IPR011948 GO:0016791
Gso18g0059 478 ProSiteProfiles FCP1 homology domain profile. 282 441 IPR004274 -
Gso18g0059 478 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 465 - -
Gso18g0059 478 CDD HAD_FCP1-like 288 419 - -
Gso18g0059 478 SUPERFAMILY HAD-like 276 452 IPR036412 -
Gso18g0059 478 Pfam NLI interacting factor-like phosphatase 288 448 IPR004274 -
Gso18g0059 478 MobiDBLite consensus disorder prediction 1 69 - -
Gso18g0059 478 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 465 - -
Gso18g0059 478 Gene3D - 272 456 IPR023214 -
Gso18g0059 478 MobiDBLite consensus disorder prediction 26 45 - -
Gso18g0059 478 SMART forpap2 285 429 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0059 Gso-Chr18 511814 516409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0059 K17616 K12778 gmx:100804307 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0059 18 511814 516409 Gso13g1562 13 30957620 30962124 GST