Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0058 ATGGTCGTTGCACAGAAAGTTAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTCACGAGGAACCTGCTCCGAATTGCCATATTCAACATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTTAATGATAAGTCTGTTCCCGCGTTAGAGATGAAGATAAAAAAACTTATGCCAGTGGATGCTGAGTCTCGCAGATTGATTGATTGGATGGAGAAAGGTGTATACGATGCTTTACAGAAGAAATACCTGAAGACGCTTCTGTTCTGTGTGTGCGAAGCAGTAGACGGACCGATGATTGAGGAATATGCATTTTCATTTAGCTATTCCAATTCTGACAACCAAGAGGTGTCCATGAATATCAACCGCACTGGAAGCAAAAAGAACCGGGGGACCTTCAAGTACAACTCGACTACAGAAATTACTCCCCAGCAGATGAGGAGTTCTGCGTGTAAGATGATCCGAACTCTGGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGCACTATTCTGATGAAGCTCCTCTACTATGATGATGTGACGCCAGCTGATTATGAGCCTCCTTTCTTCAAGGGATGCACTGATGAAGAAGCTTATCATCCATGGGAGAAGAATCCATTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTTGTGTTAGCTCTGAAGGTGAAGAGTGTGCTCGATCCTTGTGAGGATGATAATGAGGGAATCCAAGACGATTTGAGCGCTGGAGATGATTCCATGCAACAGAATGAGTATTATGATACTGACAGTGAGGTTGATCTTACTCAAGGGAATCGATATATAGTTGCTCCAATACATAAAGAGCAAGAGCAGGAAGAAAATGGCATGATTGATGAAGACAATACCCAGGACCCGGTGGAAGATGAGCAACAACTGGTCCGGGTCAAGGAGTGGATCAACTGTTGTCACCGTGACACCATCGAGCTTAATGACGTTCTATCGAATTTTCCAGACATCTCCGTGGTTCTAACAGAAGAGATCATGGAGAAGCTTGTTGAGGAAGGTGTGCTATCAAAGACAGGGAAGGAAACCTACGCCATTAACAAGGACAAGAAACTAGAATATGAGTTCCCCGTTGTGAAAGAAGAAATTGACGGTCAAATTCCTCAAGCCTTTGACAGAGGTTTGCAGTTTGAAGATCGCATATACATGAAAGCTCTCTATCATGTTCTTCCAATGACACACGTTTCACTCACTAAGCTTCAAAGCTTGCTTGAGGGAGAAGTAAACCAGACAGCAGGACGAAAGATACTAGATAAAATGGTGCGGGATGGGTTTGTTGAACCCAAAGGAAGCAAAAGATTAGGGAAACGTGTTATCCATTCTGAGTTAACTGAAAGAAAATTCATTGAAGTCCAGAAAGCTCTAAGTGCTACTGAAGCTATGGATGTTGATCACTGTGAACCAAACAGCAAGTTCAAAAAAACTGGTTTCCATTTAAATGGAAGCAACTATGACGTGTCTACATGTGGGGTTCTCCACTCCATTGGATCAGATTTAACAAGAATGAAAGTGACATCTGAGACAAACTATAGTGACTCCGGGAGTGGACAGAAAACTATAAAGGCAAAAGAGCCCGGGAACACCCCCATAAGCAGGCCAGTTATCTCAAGAGAGAGTTTTGCGCAAGGCAAAGAGAATGGCAGAACAAATGGAATTGAAAATCAAGGGGACGAAGCTGATACAATTATATGCAGCAAGTCTTCCCAAGACAAACGACCAAGGAAAACTAGCGCGGTGAAGGAGCCTATCAATCAAAATATGAAGCGCCAGAGATCTGAGGCTCAGTAA 1836 0.4303 MVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSNSDNQEVSMNINRTGSKKNRGTFKYNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFKGCTDEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIQDDLSAGDDSMQQNEYYDTDSEVDLTQGNRYIVAPIHKEQEQEENGMIDEDNTQDPVEDEQQLVRVKEWINCCHRDTIELNDVLSNFPDISVVLTEEIMEKLVEEGVLSKTGKETYAINKDKKLEYEFPVVKEEIDGQIPQAFDRGLQFEDRIYMKALYHVLPMTHVSLTKLQSLLEGEVNQTAGRKILDKMVRDGFVEPKGSKRLGKRVIHSELTERKFIEVQKALSATEAMDVDHCEPNSKFKKTGFHLNGSNYDVSTCGVLHSIGSDLTRMKVTSETNYSDSGSGQKTIKAKEPGNTPISRPVISRESFAQGKENGRTNGIENQGDEADTIICSKSSQDKRPRKTSAVKEPINQNMKRQRSEAQ* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0058 611 Pfam HORMA domain 17 223 IPR003511 -
Gso18g0058 611 MobiDBLite consensus disorder prediction 595 611 - -
Gso18g0058 611 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Gso18g0058 611 MobiDBLite consensus disorder prediction 580 594 - -
Gso18g0058 611 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 6 598 - -
Gso18g0058 611 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
Gso18g0058 611 MobiDBLite consensus disorder prediction 522 611 - -
Gso18g0058 611 MobiDBLite consensus disorder prediction 558 579 - -
Gso18g0058 611 Gene3D HORMA domain 5 275 IPR036570 -
Gso18g0058 611 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 6 598 - -
Gso18g0058 611 MobiDBLite consensus disorder prediction 522 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0058 Gso-Chr18 503692 509627 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0058 K12778 - gmx:100792473 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0058 18 503692 509627 Gso13g1563 13 30963583 30975914 GST