Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1563 ATGGTTGAGGAATATGCATTTTCATTTAGCTATTCAGATTCTGATAATCAAGAGGTGTCGATGAATATCAACCGCACTGGAAACAAAAAGAACCGGGGGACCTTCAAGTGTAATTCGACTACAGAAGTTACTCCCCATCAGATGAGGAGTTCTGCGTGTAAGATGATCCGAACTCTCGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGCACTATTATGATGAAGCTCCTCTACTATGATGATGTGACGCCAGCTGATTATGAGCCTCCTTTCTTCAAGGGATGCACTGATGAAGAAGCTTATCATCCATGGGAGAAGAATCCATTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTTGTGTTAGCTCTGAAGGTGAAGAGTGTGCTCGACCCTTGTGAGGATGATAATGAGGGAGTCCAAGACGATTTCAGCGCTGGAGATGATTCCATGCAACAGAATGAATATTATGATACTGACAGTGAGGTTTATCTTACTCAAGGGAATCGATATATAGTTGCTCCTATAGACAATACCCAGGACCCGGTGGAAGATGAGCAACAACTGGTCCGGGTCAAGGAGTGGATCAACTGTTGTCACCGTGACACTATCGAGTTTAATGATGTTCTATCGAATTTTCCAGACATCTCCGTGGTTCTATCCGAAGAGATCACAGACAAGCTTGTTGAGGAGGGTGTGCTATCAAAGATAGGGAAGGAAACCTACGCCATTAACAAGGACAAGAACCTTGAATATGAGTTCGCCATTGTGAAGGAAGAAATTGACGGTCAAATTCCTCAAGTCTTTGACAGAGCTTTGCAGGTTGAAGATCGCATATACATGAAAGCTCTCTATCATGTTCTTCCGATGACACACGTTTCAGTCACTAAGCTTCAAAGCTTGCTTGAGGGAGAAGTAAACCAGATAGCAGCACGAAAGATCCTAGATAAAATGGTGCGGCATGGAATTATTGAACCCAAAGGCAGCAAAAGATTAGGGAAACGTGTTATCCATTCTGACTTAACTGAAAGGAAATTCATTGAAGTCCAGAAAGCTCTAAGTGCTACTACTGAAGCAATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAAAAAACTGGTTTCCGTTTAAATGGAAGCAACTATGACGTGTCTACATATGGGGTTCTCCACTCCATTGGATCAGATTTAACACGAATGAAAGTGACATCTGAGACAAACTATAATGACTCCGGGAATGGACAGAAAGCATCAAAGGCAAAAGAGCCCGGGAACACCCCCATAAGCAGGCCAGTTATTTCAAGAGAGAGTTTTGCGCAAGGCAAAGAGAACGGAAGAACAAATGGAATAGCAAATCAAGGGGACGAAGCTGATACAATCATATGCAGCAAGTCTTCCCAAGACAAACGACCAAGGAAAACTAGCGCGGCGAAGGAGCCTATCCATCAAAACATGAAGCGACAGAGATCTGAGGCTCAGTGA 1497 0.4329 MVEEYAFSFSYSDSDNQEVSMNINRTGNKKNRGTFKCNSTTEVTPHQMRSSACKMIRTLVQLMRTLEKMPEERTIMMKLLYYDDVTPADYEPPFFKGCTDEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGVQDDFSAGDDSMQQNEYYDTDSEVYLTQGNRYIVAPIDNTQDPVEDEQQLVRVKEWINCCHRDTIEFNDVLSNFPDISVVLSEEITDKLVEEGVLSKIGKETYAINKDKNLEYEFAIVKEEIDGQIPQVFDRALQVEDRIYMKALYHVLPMTHVSVTKLQSLLEGEVNQIAARKILDKMVRHGIIEPKGSKRLGKRVIHSDLTERKFIEVQKALSATTEAMDVDHCEPNSKSKKTGFRLNGSNYDVSTYGVLHSIGSDLTRMKVTSETNYNDSGNGQKASKAKEPGNTPISRPVISRESFAQGKENGRTNGIANQGDEADTIICSKSSQDKRPRKTSAAKEPIHQNMKRQRSEAQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1563 498 Pfam HORMA domain 1 123 IPR003511 -
Gso13g1563 498 Gene3D HORMA domain 1 174 IPR036570 -
Gso13g1563 498 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 3 482 - -
Gso13g1563 498 MobiDBLite consensus disorder prediction 410 427 - -
Gso13g1563 498 MobiDBLite consensus disorder prediction 445 466 - -
Gso13g1563 498 MobiDBLite consensus disorder prediction 410 498 - -
Gso13g1563 498 SUPERFAMILY The spindle assembly checkpoint protein mad2 2 137 IPR036570 -
Gso13g1563 498 MobiDBLite consensus disorder prediction 467 498 - -
Gso13g1563 498 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 3 482 - -
Gso13g1563 498 ProSiteProfiles HORMA domain profile. 1 130 IPR003511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1563 Gso-Chr13 30963583 30975914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1563 K12778 - gmx:100792473 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0058 18 503692 509627 Gso13g1563 13 30963583 30975914 GST