Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0049 ATGTCTCGGGTTGATAACAGAAATTCCTCAGCCACCAAGCGTGCTAGGACTGATGGTAGTCGTAGGGAAGATGATTGGACATGCCCCAGCTGTGGTAATGTTAATTTCTCTTTCAGGACAACTTGTAACATGCGTAATTGCACTCAACCAAGGCCGGCTGATCATAATTCTAAATCTGCTGCCAAGCCTCTACAAGCTCCACAGGGTTATTCATCCTCAGCTCCTTACTTAGGTTCTAATACCCCCTCTTCAATATATCTTGGTGTGCCACCATATGGGTCTTCTCTGTTCAATGGATCATCTGTTCCTCCCTATGATGTTCCATTTTCTGGAGGATCAGCATATCACTACAACTATGGTAGTCGCCTTTCTGCTGGGAGTCCTTATAGACCGTTGCATTTATCTGGACCAACACCCTACACTGGTGGACCAGTGATGGGAAATGGTGGGATATATGGAATGCCCCAACTGTTGGATCGATATGGCCTGGGCGTGCCTATTGGACCTGGGACAATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTTTTCATTCAGAACTATCTGCAACATGAGAAAGTGCAACACACCCAAACCTGGATCCCAGGCCTCAAAGTCGGACAAAAATTCTAAGCAAAAGATGCCTGAGGGAAGCTGGAAGTGCGAAAAGTGTAACAACATAAACTATCCTTTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCCGAGTCTGAAAAATCTCCTTCACCAGCTGCAGATCAAAATGATCAGTGA 852 0.4554 MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYGSRLSAGSPYRPLHLSGPTPYTGGPVMGNGGIYGMPQLLDRYGLGVPIGPGTMGARPGFFHDDKSQKKDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAADQNDQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0049 283 MobiDBLite consensus disorder prediction 1 25 - -
Gso18g0049 283 MobiDBLite consensus disorder prediction 262 283 - -
Gso18g0049 283 PANTHER ZINC FINGER PROTEIN 5 274 - -
Gso18g0049 283 MobiDBLite consensus disorder prediction 50 75 - -
Gso18g0049 283 MobiDBLite consensus disorder prediction 218 246 - -
Gso18g0049 283 Gene3D - 14 54 - -
Gso18g0049 283 Gene3D - 182 223 - -
Gso18g0049 283 Gene3D - 226 269 - -
Gso18g0049 283 SUPERFAMILY Ran binding protein zinc finger-like 16 54 IPR036443 -
Gso18g0049 283 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Gso18g0049 283 Pfam Zn-finger in Ran binding protein and others 192 221 IPR001876 -
Gso18g0049 283 Pfam Zn-finger in Ran binding protein and others 237 267 IPR001876 -
Gso18g0049 283 SUPERFAMILY Ran binding protein zinc finger-like 184 223 IPR036443 -
Gso18g0049 283 MobiDBLite consensus disorder prediction 9 25 - -
Gso18g0049 283 PANTHER OS08G0521400 PROTEIN 5 274 - -
Gso18g0049 283 SUPERFAMILY Ran binding protein zinc finger-like 231 268 IPR036443 -
Gso18g0049 283 SMART zf_4 24 50 IPR001876 -
Gso18g0049 283 SMART zf_4 193 219 IPR001876 -
Gso18g0049 283 SMART zf_4 239 265 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0049 Gso-Chr18 442942 446444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0049 181 270 EF-hand Containing Proteins AT1G55040 32.222 7.95e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0049 - - gmx:100798624 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0049 18 442942 446444 Gso13g1573 13 31037303 31043324 GST