Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0039 ATGGCGGCCCCTGTTGTAGTGTCTACCTCTGTATCTGTGTGTTCCAACTATGGCTATCATCGTCGTCCATCCCTTTCCGCTCTCTCTTATTATTCGAACTCAATCTCCAACGCAAACCTAAAACTGAGTTCGCAATGTTTCTCCAACTTGCTTCGTTCGAATTCAAAAGCCCCGATTTATTGTCGCAAGTTTGTTGCTCGCACTTCAATTGGAGAGAATGAGAGTGAGAGTGAGAGTGAGAAGGATTTAGGGTTAGTAGGGGAGGACTCTGCGGCGTTTGAATTGGGCAAACAGAAAATATCTTCGTGGATTTATTTCACCGCTATTTTAGGAGTCGTTCTCTGCGTTCTCAACGTCGCATGGATTGATAATTCAACTGGCTACGGCAAAGCTTTTATTGACGCCGTTTCTACCCTTTCCGATTCTCACGAGGTGGTAATGTTGATTCTAATTCTTATATTTGCTGGTGTTCATAGTGGCTTAGCTAGCTTCCGGAACACTGGCGAGAAACTCATTGGAGAAAGACCTTTCCGTGTAATTTTTGCAGGGATATCACTACCTTTGGCTGTCAGTACTGTTGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCTGCTCCAGGATGCTCCTGGGCTTCATCAACTTCTGTGGCTTTCGAATTTCATTTCTTTCTTTTTCCTATATCCTTCAACTTTCAATCTTTTAGAGGTTGCAGCTGTTGACAAGCCTAAATTACATCTATGGGAAACTGGGATCATAAGAATAACCCGGCATCCACAGATGGTTGGCCAGGTTATCTGGTGTCTTGCTCATACGATTTGGATCGGAAATTCCGTGGCTGTTGCAGCTTCAATTGGCTTAATTGCACATCATCTATTTGGTGTCTGGAATGGAGACAGGCGACTGGCTATAAGATATGGGGAGGATTTTGAATTAGTCAAGAGTCGAACAAGTGTTGTCCCTTTTGCAGCAATCCTTGATGGCCGACAAAAGCTACCTAAAGATTTCTACAAGGAGTTTATTCGACTGCCATACTTGACAGTTACTGCACTAACTTTAGGTGCTTACTTTGCACACCCGCTTATGCAGACTGCTAGTTTCAATCTTCATTGGTAG 1125 0.4329 MAAPVVVSTSVSVCSNYGYHRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCRKFVARTSIGENESESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTGYGKAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFNLHW* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0039 374 Gene3D - 139 325 - -
Gso18g0039 374 Pfam NnrU protein 146 365 IPR009915 -
Gso18g0039 374 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 1 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0039 Gso-Chr18 361142 364753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0039 K15744 - gmx:100820507 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0039 18 361142 364753 Gso13g1583 13 31121259 31124334 GST