Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1583 ATGGCGGCCTCTGTTGTAGTGTCTACCTCTCTGTCTGTGTGTTTCAACTATGGCTATCATCGTCGTCCATCCATTTCCGCTCTCTCTTGTTATTCGAATTCCATCACCAAAACAAACCTAAAACTCAGTTCGCAATGTTTCTCCAACTCGAATTCGGTAGCCCCGATTTATTGCCGCAAGTTTGTTGCTCGCACTTCAATTGGAGAAAACGAGAGCGAGAGCGAGAAGGAGTTAGGGTTCGTGGGGGAGGACTCTGCGGTGTTTGAATTGGGCAAACAGAAAGTATCTTCGTGGATTTATTTCACCGCTATTTTGGGAGTCGTTCTCTATGTTCTTAACGTCGCATGGATTGATAATTCAACTGGCTACGGCAAAGCTTTTATTGACGCCGTTTCAACGCTTTCCGATTCTAGCGAGGTGGTAATGTTGATCCTAATTCTCATATTTGCTGGTGTCCATAGTGGCTTAGCTAGCTTCCGGAACACTGGTGAGAAACTCATTGGAGAAAGACCTTTCCGTGTACTTTTTGCAGGGATATCACTACCTTTGGCTGTCAGTACTGTTGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCAGCTCCAGGATGCTCCTGGGCTTCATCAACTTCTGTGGCTTTCAAATTTCATTTCTTTCTTTTTCCTATATCCTTCAACTTTCAATCTTTTAGAGGTTGCAGCTGTTGACAAGCCTAAATTGCATCTATGGGAAACTGGGATCATAAGAATAACCAGGCATCCACAGATGGTTGGGCAGGTTATCTGGTGTCTTGCTCATACGATTTGGATTGGAAATTCCGTGGCTGTTGCAGCTTCAATTGGCTTGATTGCACATCATCTATTTGGTGTCTGGAATGGAGACAGGCGACTGGCTATAAGATATGGGGAGGATTTTGAATTAGTTAAGAGTCGAACAAGTGTTGTCCCTTTTGCAGCAATCCTCGATGGCCGACAAGAGTTACCTAAAGATTTCTACAAGGAGTTTATTCGACTGCCATACTTGACAGTTACTGCAATAACGTTAGGTGCTTACTTTGCACACCCGCTTATGCAGGCTGCTAGTTTCAACCTTCATTGGTAG 1110 0.4387 MAASVVVSTSLSVCFNYGYHRRPSISALSCYSNSITKTNLKLSSQCFSNSNSVAPIYCRKFVARTSIGENESESEKELGFVGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVAWIDNSTGYGKAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVLFAGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFELVKSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTAITLGAYFAHPLMQAASFNLHW* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1583 369 Pfam NnrU protein 141 360 IPR009915 -
Gso13g1583 369 Gene3D - 134 320 - -
Gso13g1583 369 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1583 Gso-Chr13 31121259 31124334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1583 K15744 - gmx:100793910 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0039 18 361142 364753 Gso13g1583 13 31121259 31124334 GST