Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0036 ATGCCCATCTTCTCTGCAACGTTGGGCTCCTTCACTTCCATCTCCTCCTCCTTCCTCTCACAGTCACACCTTTCTCCTTTCGTGAAGACACCTTGCCAATGGCAGCATCACTATCACACTGCTAAAGTCTTGGTCTCTGCCTCTGGCAATACCCAAATTGACCAAAATCCCGACTCTGGACTTCTTCAACGCCCTACTCCTCCAGACCCACTCGATGACGCTCGTCAGGCTCGGAGATCGTCAGATTGGAAGGCTGCAAAGACATATCAAGATAGTAAAGTCATTTATAATGGTAGGGTTGAAGGTTTTAATTCTGGAGGCCTGCTGGTTCGGTTTTATTCTGTTATGGGCTTTCTCCCATTCCCACAATTGAGTCCAGTGCATGCTTCTAAAGAACCAGAGAAATCTATCCAAGAAATTGCACAAGGCTTAATTGGTTCAATCATGTCGGTGAAGGTAATTCTAGCAGATGAGGATAACAAGAAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCCAAATATTCAAAACAGGTCAATGTAGGGGACATTTTTGAAGTAAGAGTTGGTTATGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCACCTTACTGGACTAATACACGTCTCAGAAGTGTCATGGGATCTAATTCAGGATGTCAGAGATATCTTAAAAGTAGGTGATGAAGTGAGGGCCAAAGTTGTTGGTATTGATTGGGGAAAATCAAGGATTAACCTATCAATTAGACAGCTAGAAGAAGATCCACTCTTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGATCCTGATTCTATGAGTGGTGGTGATAGCGGTAGCATTGAGCCTCTTCCAGGGCTTGAAACAATCCTTGAAGAGCTACTACAGGAAGATGGAATATATGACGTAAGAATCAGCCGTCAAGGGTTTGAAAAAAGAGTGGTCTCGCAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACGAACCAAAGGTTTACTCTACTTGCCCGGGCTGGAAGACAGGTGCAGGAGATACATCTCACTACATCCCTTGATCAGGAAGGTATCAGGAGGGCATTACAACGAGTATTGGAGCGTGTCCCCTGA 1137 0.4477 MPIFSATLGSFTSISSSFLSQSHLSPFVKTPCQWQHHYHTAKVLVSASGNTQIDQNPDSGLLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKVIYNGRVEGFNSGGLLVRFYSVMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWSKYSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWDLIQDVRDILKVGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIRRALQRVLERVP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0036 378 SUPERFAMILY Nucleic acid-binding proteins 168 261 IPR012340 -
Gso18g0036 378 ProSiteProfiles S1 domain profile. 93 168 IPR003029 GO:0003676
Gso18g0036 378 ProSiteProfiles S1 domain profile. 182 256 IPR003029 GO:0003676
Gso18g0036 378 MobiDBLite consensus disorder prediction 54 82 - -
Gso18g0036 378 SUPERFAMILY Nucleic acid-binding proteins 94 168 IPR012340 -
Gso18g0036 378 Gene3D - 174 268 IPR012340 -
Gso18g0036 378 Gene3D - 83 173 IPR012340 -
Gso18g0036 378 Pfam S1 RNA binding domain 179 256 IPR003029 GO:0003676
Gso18g0036 378 PANTHER OS03G0844900 PROTEIN 1 378 - -
Gso18g0036 378 SMART S1_6 91 168 IPR022967 -
Gso18g0036 378 SMART S1_6 180 256 IPR022967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0036 Gso-Chr18 338609 342488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0036 - - gmx:100798303 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0036 18 338609 342488 Gso13g1587 13 31143154 31147206 GST