Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1587 ATGCCCATATTCTCTGCAAGCTTGGGCTCCTTCACTTCCATCTCCTTCCTCTCAACTTCACAATCACAATCACACCTTTCTCCTTTCAAGTTAACTGTGAAGACACCTTGGCAATGGCAGCATCATCACTATCTCACTTCTAAAGTGTTGGTCTCTGCCTCTGGCAACACCCAAATTCCTAATACTGAACTTCTTCAACGCCCTACTCCTCCAGACCCTCTCGATGACGCTCGTCAGGCTCGGAGATCGTCAGATTGGAAGGCTGCAAAGACATATCAAGATAGTAAACTCATCTATAATGGTAGAGTGGAAGGTTTTAATTCTGGAGGCCTGCTGGTTCGGTTTTATTCTATTATGGGCTTTCTCCCATTCCCCCAATTGAGTCCAGTGCATGCTTCTAAAGAACCAGAGAAATCTATACAAGAAATTGCACAAGGCTTAATTGGTTCAATCATGTCGGTGAAGGTAATTCTAGCAGATGAGGATAACAAGAAATTGATCTTATCTGAAAAGGAAGCTGCCTGGTCCAAATTTTCAAAACAGGTTAATGTAGGGGACATTTTTGAAGTAAGAGTTGGTTATGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCGCCTTACTGGACTAATACACGTGTCAGAAGTGTCATGGGATCTAATTCAGGATGTCAGAAATATCTTAAAAGTGGGCGATGAAGTGAGGGCCAAAGTTGTCGGTATTGATTGGGGAAAATCAAGGATTAACCTATCAATTAGACAGCTAGAAGAAGATCCACTCTTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGATCCTGATTCCATGAGCGGTGGTGATAGCGGTAGCATTGAGCCTCTTCCAGGACTTGAAACAATCCTTGAAGAGCTGCTACAGGAAGATGGAATATATGACGTAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCACGAACCAAAGGTTTACTCTTCTTGCTCGGGCTGGAAGACAGGTGCAGGAGATACACCTGACTACATCCCTTGATCAGGAAGGTATCAAGAAGGCATTACAACGAGTACTGGAGCGTGTCCCCTGA 1146 0.4415 MPIFSASLGSFTSISFLSTSQSQSHLSPFKLTVKTPWQWQHHHYLTSKVLVSASGNTQIPNTELLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKLIYNGRVEGFNSGGLLVRFYSIMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLILSEKEAAWSKFSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWDLIQDVRNILKVGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKKALQRVLERVP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1587 381 ProSiteProfiles S1 domain profile. 185 259 IPR003029 GO:0003676
Gso13g1587 381 SUPERFAMILY Nucleic acid-binding proteins 98 171 IPR012340 -
Gso13g1587 381 SMART S1_6 183 259 IPR022967 -
Gso13g1587 381 SMART S1_6 94 171 IPR022967 -
Gso13g1587 381 SUPERFAMILY Nucleic acid-binding proteins 172 264 IPR012340 -
Gso13g1587 381 PANTHER OS03G0844900 PROTEIN 2 381 - -
Gso13g1587 381 MobiDBLite consensus disorder prediction 60 87 - -
Gso13g1587 381 Pfam S1 RNA binding domain 182 259 IPR003029 GO:0003676
Gso13g1587 381 ProSiteProfiles S1 domain profile. 96 171 IPR003029 GO:0003676
Gso13g1587 381 Gene3D - 178 271 IPR012340 -
Gso13g1587 381 Gene3D - 86 177 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1587 Gso-Chr13 31143154 31147206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1587 - - gmx:100786308 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0036 18 338609 342488 Gso13g1587 13 31143154 31147206 GST