Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0024 ATGAGTACGGTGGGAGAAGGGAAGGTGAGTAGTAATGGTCATGGATGTTGCAAATCAGGGCCAGGCTATGCTTCCCCACTGGAAGCCATTTCTGGTCCCAGAGAGTCTCTCATTTATGTAACCTCTGTCTACACAGGGACCGGAATAGAGAAGCCAGACTATTTGGCGACAGTGGATGTGGATCCAAACTCTCCAACTTATTCCAAAGTCATCCATAGGCTTCCTGTTCCTTATTTAGGTGACGAATTGCATCACACAGGCTGGAATTCATGCAGCTCTTGCCATGGAGACCCCTCAGCAGACCGACGATTTCTCATCGTACCTGCACTCGTATCAGGTCGAGTATATGTGGTTGATGTGAAAACAAATCCAAGGGCTCCATCTTTGCACAAAGTTGTCGAGCCTGCCGATATCATACAGAAGACTGGATTAGCTTATCCACACACATCTCACTGCCTTGCTTCTGGTGATATAATGATCTCGTGTCTTGGAGATAAAGATGGAAATGCTGCAGGAAATGGATTTCTTCTTCTTGATTCTGAGTTTAATGTGAAGGGAAGGTGGGAGAAACCGGGTCACAGCCCACTATTTGGGTATGACTTTTGGTACCAACCACGTCACAATACCATGATTAGCACATCATGGGGTGCTCCTAGTGCTTTTACAAAAGGTTTTAACTTACAGCATCTCTCTGATGGATTATACGGGAGGCATCTCCATGTATATAGCTGGCCTGGGGGCGAACTGAGACAAACAATGGACCTTGGTGATTCAGGGCTTATACCCTTAGAGATAAGGTTTTTGCATGATCCTGCTAAAGATACAGGTTTTGTCGGCAGTGCATTGACAAGTAACATGATACGATTTTTTAAGACCCAAGATGAATCATGGAGCCATGAGGTTGCCATATCAGTGAAACCATTGAAAGTGCAAAACTGGATTCTTCCTGAAATGCCTGGGCTTATAACTGATTTTCTGATTTCTCTTGATGATCGGTTTCTGTATTTTGTAAACTGGCTTCATGGGGATATAAGGCAGTATAACATCGAGGACGTTAAAAATCCTAAACTGACTGGACAAGTATGGGTTGGTGGACTTATCCAGAAAGGAAGCCCTGTAGTAGCTATAACTGATGATGGTGAAACATGGCAAGCTGAAGTTCCAGAGATTCAGGGAAACAAGTTGAGAGGGGGCCCTCAGATGATTCAATTGAGTTTAGATGGGAAGCGGCTCTATGCTACCAACTCACTATTTAGTACTTGGGACAAACAATTTTATCCAGAGCTTGTCCAGAAAGGCTCCCACATAATACAGATTGATGTTGATACTGAGAAAGGTGGACTGAAAATCAACCCCAACTTCTTTGTGGACTTTGGAACTGAGCCTGATGGTCCTTCTCTTGCCCATGAGATGAGATATCCTGGTGGTGACTGTACTTCAGATATATGGATTTAA 1455 0.4405 MSTVGEGKVSSNGHGCCKSGPGYASPLEAISGPRESLIYVTSVYTGTGIEKPDYLATVDVDPNSPTYSKVIHRLPVPYLGDELHHTGWNSCSSCHGDPSADRRFLIVPALVSGRVYVVDVKTNPRAPSLHKVVEPADIIQKTGLAYPHTSHCLASGDIMISCLGDKDGNAAGNGFLLLDSEFNVKGRWEKPGHSPLFGYDFWYQPRHNTMISTSWGAPSAFTKGFNLQHLSDGLYGRHLHVYSWPGGELRQTMDLGDSGLIPLEIRFLHDPAKDTGFVGSALTSNMIRFFKTQDESWSHEVAISVKPLKVQNWILPEMPGLITDFLISLDDRFLYFVNWLHGDIRQYNIEDVKNPKLTGQVWVGGLIQKGSPVVAITDDGETWQAEVPEIQGNKLRGGPQMIQLSLDGKRLYATNSLFSTWDKQFYPELVQKGSHIIQIDVDTEKGGLKINPNFFVDFGTEPDGPSLAHEMRYPGGDCTSDIWI* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0024 484 Pfam 56kDa selenium binding protein (SBP56) 17 484 IPR008826 GO:0008430
Gso18g0024 484 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 51 416 - -
Gso18g0024 484 PANTHER METHANETHIOL OXIDASE 12 484 IPR008826 GO:0008430
Gso18g0024 484 PANTHER SELENIUM-BINDING PROTEIN 1 12 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0024 Gso-Chr18 243856 247410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0024 K17285 - gmx:100794235 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0024 18 243856 247410 Gso13g1600 13 31244462 31248191 GST