Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1600 ATGAGTAGCGTGTTGGAGCATGGTGTTGTGGGATGTTGCAAATCAGGGCCAGGCTATGCTACCCCACTGGAAGCCATGTCTGGTCCAAGAGAGTCTCTTATTTATGTAACTGCTGTCTACACAGGGACAGGAATAGAGAAGCCGGACTATTTGGCCACAGTGGACATAGATCCAAACTCTCCAACTTATTCCAAAGTCATCCATAGGCTTCGTGTTCCTTATTTAGGTGACGAATTGCATCACACTGGTTGGAATTCATGCAGCTCTTGCCATGGAGACCCCTCGGCAGACCGACGATTTCTCATCGCACCTGCACTCGTTTCAGGTCGCATATATGTGGTTGATGTGAAAACAAATCCAAGGGCTCCATCTTTGCACAAAGTTGTTGAGCCTGCCGATATCATACAGAAGACTGGATTAGCTTATCCACACACATCTCACTGCCTTGCTTCTGGTGACATAATGATCTCATGTCTTGGAGATAAAGATGGAAATGCTGCAGGAAATGGATTTCTTCTTCTTGATTCAGAGTTTAATGTGACGGGAAGGTGGGAGAAACCGGGTCACAGTCCACTATTTGGATATGACTTTTGGTACCAACCACGTCACAATACCATGATTAGCACATCATGGGGTGCTCCTAGTGCTTTTACAAAAGGTTTTAACTTACAGCATCTTTCTGATGGATTATACGGGAGGCATCTCCATGTATATAGCTGGCCTGGGGGCGAACTGAGACAAACACTGGACCTTGGTGATTCAGGGCTTTTACCCTTAGAGATAAGGTTCTTGCATGATCCTGCTAAAGATACAGGTTTTGTCGGGAGTGCATTGACAAGTAACATGATACGATTTTTTAAGACCCAAGATGAATCATGGAGCCATGAGGTTGCCATATCAGTGAAACCACTGAAAGTGCAAAACTGGATTCTTCCTGAAATGCCTGGGCTTATAACTGATTTTCTGATTTCTCTTGATGATCGGTTTCTGTACTTTGTAAACTGGCTTCATGGGGATATCAGACAGTATAACATTGAGAACCTTAAAAATCCTAAACTGACCGGACAAGTATGGGTTGGTGGACTTATCCAGAAAGGAAGCCCTGTAGTAGCTATAACTGATGATGGTGAAACTTGGCAAGCTGAAGTGCCTGAGATTCAGGGCAACAAGTTGAGAGGGGGCCCTCAGATGATTCAATTGAGTTTAGATGGGAAACGGCTCTATGCTACCAACTCACTATTTAGTACATGGGACAAACAGTTTTATCCAGAGCTTGTCCAGAAAGGCTCCCACATAATACAGATTGATGTTGATACTGAGAAAGGTGGCCTGAAAATCAACCCCAACTTCTTTGTGGACTTTGGAGCTGAGCCTGATGGTCCTTCTCTTGCCCATGAGATGAGATATCCTGGTGGTGACTGCACTTCAGATATATGGATTTAA 1443 0.4435 MSSVLEHGVVGCCKSGPGYATPLEAMSGPRESLIYVTAVYTGTGIEKPDYLATVDIDPNSPTYSKVIHRLRVPYLGDELHHTGWNSCSSCHGDPSADRRFLIAPALVSGRIYVVDVKTNPRAPSLHKVVEPADIIQKTGLAYPHTSHCLASGDIMISCLGDKDGNAAGNGFLLLDSEFNVTGRWEKPGHSPLFGYDFWYQPRHNTMISTSWGAPSAFTKGFNLQHLSDGLYGRHLHVYSWPGGELRQTLDLGDSGLLPLEIRFLHDPAKDTGFVGSALTSNMIRFFKTQDESWSHEVAISVKPLKVQNWILPEMPGLITDFLISLDDRFLYFVNWLHGDIRQYNIENLKNPKLTGQVWVGGLIQKGSPVVAITDDGETWQAEVPEIQGNKLRGGPQMIQLSLDGKRLYATNSLFSTWDKQFYPELVQKGSHIIQIDVDTEKGGLKINPNFFVDFGAEPDGPSLAHEMRYPGGDCTSDIWI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1600 480 Pfam 56kDa selenium binding protein (SBP56) 13 480 IPR008826 GO:0008430
Gso13g1600 480 PANTHER SELENIUM-BINDING PROTEIN 1 4 480 - -
Gso13g1600 480 PANTHER METHANETHIOL OXIDASE 4 480 IPR008826 GO:0008430
Gso13g1600 480 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 48 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1600 Gso-Chr13 31244462 31248191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1600 K17285 - gmx:100788278 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0024 18 243856 247410 Gso13g1600 13 31244462 31248191 GST