Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0018 ATGAATATGAATATGGGTTCTTCTTCCCCTCCGGACACTAGCAAGAGCATAAAGCTAGAGCGATACAACAGCTACATCCGGAGACTCAACAGCACCAAGCTCCTCAACGCCTCCTCCAAACTCCTCTTCCGCGCCACTCTCTTGGTCGCACTCATCCTCGTCTTCCTCTTCACCTTCAACTACCCTCCCCTCTCCGCCACCGACTCCACCCACCGCCACCTCCACGCCCACTCCCACTACTTCCTCTCCTCCTCCTCCTTCGGCGCCTGGGAGAAGCAGGTCCGCCACTCCGCCTCCCCCCGCCGCCCCAACGGCCTCACCGTCCTTGTCACTGGGGCTGCGGGCTTCGTGGGCAGCCACTGCTCCCTGGCCCTGAAGAAGCGCGGCGACGGTGTCCTGGGGCTTGACAACTTCAACAACTACTACGACCCTTCCCTTAAACGCGCCCGGCAGGCAATGCTCTGGAAACACCAAGTGTTCATCGTGGAAGGTGACCTCAACGACACCCCCTTGCTCCAGAAGCTCTTCGACCTCGTCCCCTTCACCCACATCCTCCACCTGGCCGCACAGGCCGGCGTCCGCTACGCCATGCAGAACCCCCAATCCTACGTCACCGCCAACATCGCTGGCTTCGTCAACCTTCTCGAGGCTGCCAAATCCGCCAACCCCCAACCCGCCATTGTCTGGGCTTCGTCCAGCTCCGTCTACGGCCTCAACACCCAAAACCCTTTCTCCGAGCTCCACCGCACCGACCAGCCCGCCAGCCTCTACGCCGCCACCAAGAAGGCCGGCGAGGAAATCGCCCACACCTACAACCACATTTACGGCCTCTCCCTCACCGGACTCCGTTTCTTCACCGTCTACGGCCCCTGGGGAAGACCCGACATGGCTTACTTCTTCTTCACCAAAGACATCCTCCATGGGAAGACCATCGACGTCTACCAGACGCCGGAGGGGAAGCAGGTGGCGCGTGACTTTACCTACATCGACGACATCGTCAAGGGTTGCCTCGGCGCCCTCGACTCCGCCCAGAAGAGCACCGGGAGCGGCGGCAAGAAGCGGGGCCCTGCCCAGCTCAGAGTGTACAATCTAGGGAACACGTCACCGGTGCCGGTGGGGACCTTGGTGTCCATTCTAGAAGGTTTGCTGAAAACCAAGGCCAAGAAGCACGTCATTAAGATGCCATCTAACGGCGACGTTCCCTTCACTCACGCCAACGTCAGCTTGGCCTTCAGGGATTTCGCCTACAAACCCACCACCGATCTCTCCACCGGTCTCAGCAAGTTCGTCAAGTGGTACCTCGGTTATTACGGCCTCCAGCCAAGCCTGAAAAAGGATAATCACCTTCACAATATTGAATGA 1362 0.5947 MNMNMGSSSPPDTSKSIKLERYNSYIRRLNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLSATDSTHRHLHAHSHYFLSSSSFGAWEKQVRHSASPRRPNGLTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNNYYDPSLKRARQAMLWKHQVFIVEGDLNDTPLLQKLFDLVPFTHILHLAAQAGVRYAMQNPQSYVTANIAGFVNLLEAAKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTPEGKQVARDFTYIDDIVKGCLGALDSAQKSTGSGGKKRGPAQLRVYNLGNTSPVPVGTLVSILEGLLKTKAKKHVIKMPSNGDVPFTHANVSLAFRDFAYKPTTDLSTGLSKFVKWYLGYYGLQPSLKKDNHLHNIE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0018 453 Pfam NAD dependent epimerase/dehydratase family 108 345 IPR001509 -
Gso18g0018 453 PANTHER EPIMERASE-RELATED 10 450 - -
Gso18g0018 453 Gene3D - 285 433 - -
Gso18g0018 453 Gene3D - 109 420 - -
Gso18g0018 453 PANTHER BNAC03G74010D PROTEIN 10 450 - -
Gso18g0018 453 PRINTS Nucleotide sugar epimerase signature 134 150 - -
Gso18g0018 453 PRINTS Nucleotide sugar epimerase signature 324 339 - -
Gso18g0018 453 PRINTS Nucleotide sugar epimerase signature 359 374 - -
Gso18g0018 453 PRINTS Nucleotide sugar epimerase signature 399 416 - -
Gso18g0018 453 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 439 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0018 Gso-Chr18 186544 188484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0018 5 446 Miscellaneous Gene Families AT3G23820 78.146 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0018 K08679 - gmx:100811409 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0018 18 186544 188484 Gso13g1604 13 31283691 31285703 GST