Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1604 ATGTGTGTATTTCCTTTGGGCTTGAAACTCAAAACTATAATAATGGGTTCTTCTTCTCCTCCGGACACTAGCAAGAGCATAAAGCTAGAGCGATACAACAGCTACATCAGGAGACTCAACAGCACCAAACTCCTCAACGCCTCCTCCAAACTCCTCTTCCGTGCCACTATCTTAGTCGCACTCATCCTCGTCTTCCTCTTCACCTTCAACTACCCTCCCCTCGCCCCAGACTTCACCTCCCACCGCCACCTCCACTCCCACTCCCACTTCCTCTCCTCCTCCTCCTCCTCCTTCGCCTCCTGGGAGAAGCAGGTCCGCCACTCCTCCACCCCTCGCCGCCCCAACGGCCTCACCGTCCTCGTCACCGGCGCCGCTGGCTTCGTCGGCAGCCACTGCTCCCTTGCCCTCAAAAAACGCGGCGACGGCGTTCTCGGGCTCGACAACTTCAACAGCTACTACGATCCCTCCCTGAAACGCTCCCGTCAGGCAATGCTCTGGAAACACCAGGTTTTCATCGTGGAAGGTGACCTTAACGACACCCCCTTGCTTGAGAAGCTCTTCGACGTTGTCCCCTTCACCCACATCCTCCACCTCGCCGCTCAGGCTGGCGTCCGCTACGCCATGCAGAACCCCCAATCCTACGTCACCGCCAACATTGCAGGCTTCGTCAACCTCCTCGAGGCTGCCAAATCCGCCAATCCCCAACCCGCCATAGTCTGGGCTTCATCCAGCTCCGTCTACGGCCTCAACACCCAAAACCCTTTCTCCGAGCTCCACCGCACCGACCAACCCGCCAGCCTCTACGCCGCCACCAAGAAAGCCGGCGAGGAGATCGCCCACACCTACAACCACATCTACGGCCTCTCCCTCACCGGACTCCGCTTCTTCACCGTCTACGGCCCCTGGGGGAGACCCGACATGGCTTACTTTTTCTTCACCAAGGACATCCTCCAAGGGAAAACCATCGACGTGTACCAGACGCAGGAGGGGAAGCAGGTGGCCCGTGACTTCACCTACATCGACGACATCGTTAAAGGCTGCCTGGGAGCCCTGGACACCGCCCAGAAGAGCACCGGGAGCGGCGGCAAGAAGAAGGGCCCCGCCCAGCTCAGAGTATACAATCTGGGGAACACTTCACCGGTGCCGGTTGGGACCTTGGTGTCCATTCTGGAAGGTCTGCTAAGCACCAAGGCCAAGAAGCACGTCATTAAGATGCCCTCAAACGGCGACGTTCCCTACACACACGCCAATGTCAGCTTGGCCTACAGGGATTTCTCTTACAATCCCACCACCGATCTCGCCACCGGTCTCAGGAAGTTCGTCAAGTGGTACCTCGGTTATTACGGCCTCCAGCAAAGGCTAAAAAAGGAATATCACCTTGACAATGAATAA 1392 0.5761 MCVFPLGLKLKTIIMGSSSPPDTSKSIKLERYNSYIRRLNSTKLLNASSKLLFRATILVALILVFLFTFNYPPLAPDFTSHRHLHSHSHFLSSSSSSFASWEKQVRHSSTPRRPNGLTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRSRQAMLWKHQVFIVEGDLNDTPLLEKLFDVVPFTHILHLAAQAGVRYAMQNPQSYVTANIAGFVNLLEAAKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYQTQEGKQVARDFTYIDDIVKGCLGALDTAQKSTGSGGKKKGPAQLRVYNLGNTSPVPVGTLVSILEGLLSTKAKKHVIKMPSNGDVPYTHANVSLAYRDFSYNPTTDLATGLRKFVKWYLGYYGLQQRLKKEYHLDNE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1604 463 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 19 459 - -
Gso13g1604 463 PANTHER EPIMERASE-RELATED 19 459 - -
Gso13g1604 463 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 111 452 IPR036291 -
Gso13g1604 463 PRINTS Nucleotide sugar epimerase signature 145 161 - -
Gso13g1604 463 PRINTS Nucleotide sugar epimerase signature 335 350 - -
Gso13g1604 463 PRINTS Nucleotide sugar epimerase signature 370 385 - -
Gso13g1604 463 PRINTS Nucleotide sugar epimerase signature 410 427 - -
Gso13g1604 463 Pfam NAD dependent epimerase/dehydratase family 119 356 IPR001509 -
Gso13g1604 463 Gene3D - 296 444 - -
Gso13g1604 463 Gene3D - 120 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1604 Gso-Chr13 31283691 31285703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1604 15 457 Miscellaneous Gene Families AT3G23820 79.249 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1604 K08679 - gmx:100786653 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0018 18 186544 188484 Gso13g1604 13 31283691 31285703 GST