Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0012 ATGAAGAAAAAGAAGCAGGTGCCGGAGTGGATGAACAGTTCTCTGTGGTCCACCCCCTCCGACCCTCCTGCTTCTGTTTCTGTTAGAGAAGAACCCCCGACAATCCCAACCAATCAGAATGCCTCTCCTCCTCTTTCTTCTTCTTCATCCGTTTCTTCTCCTACTGCTACTGCCGATGACATCTCCCGGCATGCTCAGGCTCAGGTTCAGTTGTTGGCCGAGTTGTCTAGGAAGGTGATAGACATGCGCGAGTTGAGGAGAGTCGTCGCTTCTCAAGGAATATCTGATGCTGGTGCTTTGCGCCCCACGCTCTGGAAGCTTTTGCTTGGATATCTTCCGCCCGATCGTTCCCTTTGGTCCTCTGAATTAGCCAAAAAGAGGTCCCAGTACAAAAATTTCAAAGACGACCTCCTCACGAATCCTTCAGAAATCACGAGGAGGATGTACAACTCCAACTCTGCTGCTCTTGGTATCGATGATGCAAAATCTCATACTCAGACTAGGCTCTTGCTTTCTAGATCACGTATCACTCATCAGGACCACCCTTTGAGTCTTGTCAAGACCAGCATATGGAATCAGTTCTTCCAGGACACAGAGATCATAGACCAGATTGACCGAGATGTCAATCGTACTCATCCAGATATACACTTCTTCTCTGGTGATTCTCTTTTTGCAAAATCTAATCAGGAGGCTTTAAAGACCATATTAATTGTTTTTGCAAAGTTGAACTCGGGTATAAGATATTTTCAAGGGATGAATGAAGTATTGGCTCCTCTCTTCTATGTGTTCAAAAATGACCCTGACGAGGAAAATGAAGCCTTTGCTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTGTTGAGTAGGTTCCAAGATAATTTTTGTCAACAACTTGACAATAGTATTGTTGGAATCCGTTCCACTATTACAAGATTGTCCCAGCTTTTAAAAGAACATGATGAAGAACTGTGGCGTCATCTTGAGGTCACCACTAAGGTTAATCCCCAATTCTATGCATTTAGGTGGATTATTCTCCTATTGACACAGGAATTTAATTTTGCCGACATCCTTCATATTTGGGACGTCATTTTAAGTGATCCAGAGGGTCCACAGGAGACACTTCTCAGAATATGCTGTGCAATGCTAATTCTCGTTCGTAGACGCCTTCTAGCGGGTGATTTCACTTCTAACCTCAAGATGCTGCAAAGTTATCCCTCTACAAACATTAGTCATTTGCTCCAAGTAGCAGATAAGTTACATGTACAGTCAGTCTAA 1275 0.4369 MKKKKQVPEWMNSSLWSTPSDPPASVSVREEPPTIPTNQNASPPLSSSSSVSSPTATADDISRHAQAQVQLLAELSRKVIDMRELRRVVASQGISDAGALRPTLWKLLLGYLPPDRSLWSSELAKKRSQYKNFKDDLLTNPSEITRRMYNSNSAALGIDDAKSHTQTRLLLSRSRITHQDHPLSLVKTSIWNQFFQDTEIIDQIDRDVNRTHPDIHFFSGDSLFAKSNQEALKTILIVFAKLNSGIRYFQGMNEVLAPLFYVFKNDPDEENEAFAEADTFFCFVELLSRFQDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWIILLLTQEFNFADILHIWDVILSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKMLQSYPSTNISHLLQVADKLHVQSV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0012 424 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 183 295 - -
Gso18g0012 424 Pfam Rab-GTPase-TBC domain 197 388 IPR000195 -
Gso18g0012 424 MobiDBLite consensus disorder prediction 1 59 - -
Gso18g0012 424 Gene3D - 303 423 - -
Gso18g0012 424 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 87 421 - -
Gso18g0012 424 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 87 421 - -
Gso18g0012 424 MobiDBLite consensus disorder prediction 10 24 - -
Gso18g0012 424 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 304 421 IPR035969 -
Gso18g0012 424 MobiDBLite consensus disorder prediction 31 59 - -
Gso18g0012 424 ProSiteProfiles TBC/rab GAP domain profile. 95 367 IPR000195 -
Gso18g0012 424 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 77 326 IPR035969 -
Gso18g0012 424 SMART tbc_4 90 393 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0012 Gso-Chr18 144853 150427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0012 K24796 - gmx:100784538 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0012 18 144853 150427 Gso13g1610 13 31328466 31333645 GST