Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0009 ATGAGTGCTGAGATTGATTCAACTTGTGCTCCTGAACCTCACAAAATGTCTGGCCAAAAGCTCTCTATATTTTCTGCCAAATCTGGATTTGTCATCCCTAAAAACAAATTGTCAGGGTCACTGGTCCCTATTTTCCGAGGGGCTAAAAAGCATGGGGTCACTGTTGGTGCCACCAATGAAGAAAGTTCAAAACAAATTGAGAGGAAATCAAAATGGGGACCTGATCTCACACAAGATGCAGCTGTCAGGAGGGGAAAAGTTTTAGCTTTGCAGATTCGAGTGGACCAAATTACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGAATCCAGATCAAAGCAAATCTGGCCCTCGAATTACCAGCAAGTCAGAAATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAATTAGATCCCAGTTACAAGCCTCCACGTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTCCAAGAATATCCTGGGTACAATTTTGTTGGTCTAATATATGGGCTTGAAGGTGATAATCAAAAACAACTTGAAAAGGAAACTGGTGCAAAGATAAAAATTCATGGAATCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCTGGAACTGATATCCAGTGCAATTACAAAGAGATGCATGTTAACCTATCAGCTGATAGTTTTGAAAAAGTGGATGCTGCAATGTCAATCATTGAACTGCTAGTTACCTCTGTAATTGGGAATTTAGCTGCTGGTTCTACTCCCTCTATATCAGTTTCTAGGTACAGCACTAATGTTCTGAGTCAAAGCCACGAATGCCCCCCTTCTCATGCAGATTCTCTATCTCTGGAAAACCAGGCTGTGTTGCAACCAGTAGCTGTTACACAAATGCATGGTGATAACTTCCAATACTCTAGTCCATGGTTTTCAGTGGTTCCATCTCATTCCCCTGTGTTTGCTTCGTCTGGCAGTGTAGCCCTCCCAAATCCATTAGGTCTTGCTAGAACTCCCCATTTTCCATCACACACTTCAAACATGACTTCGCCTTTTGGTGCTCAACCTGGACCTGCTGGATTTCAGCCGATTATTCCAAATCAACATGTTTCTGTGCAAGCACCACCACCAAGACAGGTTTTACAGTATTCACATATGACTCAGACAAGTCCTTTGGGTCACATTGGGCCCCCAAGAAACCCTGTACAGAATTTGTTAACTCCAACAAATGCTTCACTTTCATTTCCTGTTACTTTAAGCCAACCAACGCCAATAGGACAACATCAGACATCTGTGTCTTCAATGCATCTACCTATGTCTGGTATATCGTCATCAATACCTAACCAGTCATTGACCCATCTAGGGGTCTCTTCTGGCCAGAACGAAGCCCCTGTCACTGTTAAAATGTCTGTTGGTCCCAGCAATATGGTGCCAATGGCTTCACCAGTGGTTCCACCTGCAAGACCTGTTTCTCTACATCAACAGCCAGATGTTGCATTTAAGCCACCACAGTCAAATATGTCAATGATGCCACGATCTGCCACCTTTCCTCCACATCAAGTAGGAATATCCCCTGGACAACCATCTTCTTTGAGACCAATGCCTGTACCAATATCTGCAAACCATTTATTGGGACCTGTTTCATTTCCTTCACCTGGAATATCCCCTTCACTTCCATTGCCTCAGCAAGCAGGAATACCTAATCTTGCTTTTGGAGTTGCTCCTTATCACACCCATGTAAAACCACCAGTCTTGGGGACATCAAAATCTGGAAATTTTACTTTTCAATCACATCTGCCCAATGCAGACTATGGTCAAGTCTATTCTGGACCAAACAGTCAATCAGGTGCTACACAAGAACCACCTTCTGGTCCACGACCTCCACCATTTGGTTTTGCTGTGCCTGATCAGCCTCGTCAAATCTTTCCAAGGACACAATTCCCTGGTCAAGTGGATCAAGCCGTTGCCTTTGGGGGAAGATCAGGTTCCATCTCGAACTCAATTCCACCACCCAGACATGGTGTGTTTCCATATGCTGGTCAACCTGCACCTAGATCATCAGCCGCACAAATGGGTATGAAGAACTTCATTTCTGCCCCACAAATTCCAAATTTGACCAGTGCTGGTTCCCAAAGAGGCATGCCTATTCGAAAAAGCTATGCTACTCAGATGGCATGGGCAGATATCTCAATGCCTCTGAATCAAAAGTTTGTCAGCAATCCCCCCATGGCTTCTGGTAAGATTGCATATGCTACAGACCAAATTTATGATCCCTTTTCACCCACTTCTGCACCTCCACAACACAAAGGTAATCCTGGAAAATGA 2346 0.4373 MSAEIDSTCAPEPHKMSGQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKKHGVTVGATNEESSKQIERKSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDTQNLNPDQSKSGPRITSKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVGLIYGLEGDNQKQLEKETGAKIKIHGIKADTGEKGEIKPGTDIQCNYKEMHVNLSADSFEKVDAAMSIIELLVTSVIGNLAAGSTPSISVSRYSTNVLSQSHECPPSHADSLSLENQAVLQPVAVTQMHGDNFQYSSPWFSVVPSHSPVFASSGSVALPNPLGLARTPHFPSHTSNMTSPFGAQPGPAGFQPIIPNQHVSVQAPPPRQVLQYSHMTQTSPLGHIGPPRNPVQNLLTPTNASLSFPVTLSQPTPIGQHQTSVSSMHLPMSGISSSIPNQSLTHLGVSSGQNEAPVTVKMSVGPSNMVPMASPVVPPARPVSLHQQPDVAFKPPQSNMSMMPRSATFPPHQVGISPGQPSSLRPMPVPISANHLLGPVSFPSPGISPSLPLPQQAGIPNLAFGVAPYHTHVKPPVLGTSKSGNFTFQSHLPNADYGQVYSGPNSQSGATQEPPSGPRPPPFGFAVPDQPRQIFPRTQFPGQVDQAVAFGGRSGSISNSIPPPRHGVFPYAGQPAPRSSAAQMGMKNFISAPQIPNLTSAGSQRGMPIRKSYATQMAWADISMPLNQKFVSNPPMASGKIAYATDQIYDPFSPTSAPPQHKGNPGK* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0009 781 Coils Coil 87 107 - -
Gso18g0009 781 MobiDBLite consensus disorder prediction 611 627 - -
Gso18g0009 781 SMART kh_6 159 252 IPR004087 GO:0003676
Gso18g0009 781 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 15 774 - -
Gso18g0009 781 MobiDBLite consensus disorder prediction 611 651 - -
Gso18g0009 781 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 164 256 IPR036612 GO:0003723
Gso18g0009 781 PANTHER RNA-BINDING PROTEIN RELATED 15 774 IPR045071 -
Gso18g0009 781 Gene3D K Homology domain, type 1 156 265 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0009 Gso-Chr18 121930 127413 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0009 K13095 - gmx:102668428 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0009 18 121930 127413 Gso13g1613 13 31352425 31357992 GST